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53-4094-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8309776 [Map]; Strand: c
      • AT1G23390.1 - [+] show detail - Kelch repeat-containing F-box family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4094-1 - 5-prime edge 
    ATCGGAGATG AATATAATCC GACGGGAATC GAACTGTGGA AAGTTATAGA 
    TTCTGACGAA TCGCATTTGA AATTCGAATC GATCGGATCT ATGCCTGAGA 
    CGTATTTGGA GAAACTAAGA GGGATTAATT CTGATTGGCC GTTAACGTCG 
    ATAGTGTTGA ACGCGGTGGG AGATATGGTT TATGTGCATG ATGCGGCGGA 
    GAACGGCGGA GAGATTGTTG CGGCGGAGAT TGAAGGAGGG AAGCTTTCAT 
    NNTGNANCCN AAGNCCNTNT NNNNCTTTGG CTTNGTGTCT TNTNACAAGG 
    ATNCAATTCT NACGCCTTTN ANATCTNATT NCGGCTTAAG TTATTATNCT 
    CAATGATTCN CATGACATCA AGTCNTATTC GACTNTCATA CACTANCCAA 
    CCTTCTTCTN GCTTNTCAAA GCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8309892 [Map]; Strand: c
      • AT1G23390.1 - [+] show detail - Kelch repeat-containing F-box family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4094-1 - 3-prime edge 
    TCTCCGATGA TCCCAGCCAC AATTAAACGA TTACCGGAGA ATCCAATCGA 
    ACGTGAGTAT AAGCTACACT CGCCAGGACA GAGATCGAGA AGCTTCCANN 
    CNGGGCCGTC AGANCACAGC NTGGCGCCGT ATNNATTGTG TATGNCCTNT 
    GTATNGTAAA CGATANTAAG GAGGTTANAA AATGATGANN NNNGGTNTGT 
    ANNNATTNNC AATGNTACCN NTNNCGGGCC GTCGTACANG CANTGCCCTA 
    NACTAACCAA CCTTCTTCTA GNTTCTCAAA GCT

AT1G23390.1

Model type
Protein coding
Short Description
Kelch repeat-containing F-box family protein
Computational Description
Kelch repeat-containing F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G24760.1); Has 146 Blast hits to 146 proteins in 15 species: Archae - 0; Bacteria - 1; Metazoa - 1; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR