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53-4101-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26926957 [Map]; Strand: w
      • AT5G67470.1 - [+] show detail - formin homolog 6
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4101-1 - 5-prime edge
    TTCTCAGTTT CCGTTAGTAG TGAAGCTCAT CGGAGAATCC TTCATCAGCC 
    GCTTTTCCCG GAATCTTCTA CTCCACCACC ACCAGATTTC CAATCGACAC
    CGTCTCCTCC TCTACCCGAC ACTCCCGATC AGCCATTTTT CCCGGAGAAT
    CCTTCTACGC CTCAACAAAC TCTATTTCCT CCTCCGCCAC CTCCTGTTTC
    CGCCGACGTC AATGGCGGAT TACCGATTCC AACTGCTACT ACTCAATCAG
    CCAAGCCTGG GAAAAAAGTT GCTATCGTCA TTTCTGTTGG AATTGTCACG
    CTCGGGATGC TTTCTGCTCT AGCTTTCTTC TTGTACCGTC ATAAAGCCAA
    GCACGCCAGC GATACTCAGA AGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26926841 [Map]; Strand: w
      • AT5G67470.1 - [+] show detail - formin homolog 6
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4101-1 - 3-prime edge
    ACTGAGAAGA AGATGTAGAA GAAGAAGAAG AAGAAGAATT TGGATTGAAG 
    AGCTTTCATG GCGAATCGTG ATAAACTATT TTACAATTCT CGTCTAAATT
    CATCTTCTTC TGCTTTTTGC TCTCTCTCTG TTCTTTGCCC TTTTTTTGGT
    TGCCTTGTTC GTCAGATCGT AGAGTAATCT TCAATGGGAA GAAAAAATTA
    AGAAATGGAA AAAAGAAAGA AAAAGAAAGG AAAAAAAAGG TGAAAAAGGG
    AAAGTAATAG CTGCTGCAGT GAGAAATTCG TTTCGTATCG AGATC

AT5G67470.1

Model type
Protein coding
Short Description
formin homolog 6
Computational Description
formin homolog 6 (FH6); FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homology 1 (TAIR:AT3G25500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR