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Mutant Lines
53-4107-1

53-4107-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 3565189 [Map]; Strand: c
  - AT3G11380.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 53-4107-1 - 5-prime edge
```
CATTTCTTCC AGCAACAGAG TGATTGGTGT AGCCAATCCT CTGATCCACA 
AAGTCTTGTT CACCAGTTTA TCTGCCTTCA TCACCATTCC CTTTTCGCGA 
TAACCCGACA CCAACATATC GGGGATTCGG TTATCAAACT CAAGACCGGA 
GCACTCCCAC TCATTGTAGT ATATCTTCTC TTCTCTGCTC CTTTGGTATC 
ACCAAGCT
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 3565305 [Map]; Strand: c
- AT3G11380.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: 0; Region: exon2 (CDS)

AAGAAATGGA TAAAAAGGGG AATAAAGTGA GTCCGCCGGG CTTGAGAGAC 
CTCATCAAGA ATCTACGTGA TTCAAATCAG TTGTCCAAAG CACTTGAGGC 
ATCAACATGG ATGTGTCAAA AAAAGGTGTT TAATCTCTTT TCAGAAGATT 
ATGCAACAAG GCTTCATCTG ACTGAGAAAG TGTTGGGTTT GGAGGAAGCA 
GAGAAGTTTT TCGAAAGCAG CATCCCGGAG AATATGAAAG ATTACTCTGT 
CTACGATACA CTCTTAAGCT GTTATGCAAG ATCTAGCAAC ACTCAAAGTA 
AAGCTGAAGC CGTTTTCGAG AAGATGAGAG AGCTAGGTTT ACTATCCAAA 
CTTTCCCCAT TCAACTCGTT GATATCTCTC TACAGTGGGC AAGGGAAACT 
AAGTGTGGTC AATATACTTC TATGTGATAT GAAGCATAAG AATATAGAGC 
CTGATATTGT CACGAGGAAC AACGTTTTGA GAGCAAACGC ATACATGTTA 
GCCATAGACT CGATGGAGAA GTATAAGAGA GAGTGGGATG GTGATGATTA 
TAAAGAAACC AAGCT

AT3G11380.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G28020.1); Has 4044 Blast hits to 2539 proteins in 107 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 2; Plants - 3964; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Link: InterPro Scan - TAIR