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53-4142-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 115396 [Map]; Strand: w
      • AT4G00260.1 - [+] show detail - Transcriptional factor B3 family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-4142-1 - 5-prime edge 
    TTTCCATGTA ACACTGTTGG GACCTAGTTG TTGTGGGATT CAATATGGTT 
    CGTGTTCAGT CGAAAAGAAC AACCTCGGTG ACGGTGAGTT GTGTTCTGTC 
    TCTGGCTCTT CAAGAAACGT GGTTTGCNTT TTGGAATGTG GATCAGTGAG 
    TAGAGATAAC CAGTTTGACT ATATAACACT TAGATTCTAT TATTTTTCAG 
    AGAAAAAGAA AGTGAAGGAG AATCCAAATG GAGAAGCAGA GTCTTCTTCA 
    CGAGATCCCT CTTGTTTTGT GGCTAATGTT GCGCCTTCGA GTCTACGTTA 
    TGACTTGATG GTATTTGACT CTTAAGAACC CGAAAAGAAA CTCTCATTCT 
    AGGGTCTGAA CTCATGTTGT ATTCTAATGA ATTTTTCAGA GATTTCCAAG 
    GGGTTTTGTG AGGGATAATG GGGNANTNGG ATNTNGAAAG ATTGTTCTGA 
    TGANTGAAAA GGGCANATCA TGGAATNTTA ACTNGANACA ANAGCCATNA 
    AACGGGACAG NTTATGTTAN ANGANGGCGG NNGANNNNNN NNGANGCCAA 
    NGGGNNTNNN NNANNNGANA NNGGNCCCCN NCANNNNANG GNNNNNGCNN 
    NNNNNNNGGN AAANNNNNNN GACCNNNGNN C

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 115322 [Map]; Strand: w
      • AT4G00260.1 - [+] show detail - Transcriptional factor B3 family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-4142-1 - 3-prime edge 
    TTGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    GCCAAGTCAC TCTCTTGTCT GAAAACAACA ATGTCACCGA TTCGAAGATC 
    ATGTGAGACA GCAAACTCTT TCCAACCGTC GGTGAGTCTC TGGCCATCTA 
    TCTTCACTTC CCAAGTTCTC TTTGACGCGT CTGATCTCAG CTTCGCCGTC 
    TTCTGCTCAT ATCTTCCTTC TATATACTTC AAGAAGAAGG CTACAGGAAT 
    TGTCTGAAGC AACATGCAAA TACAAAACCA GACTCATCTT TAGCTTCTCA 
    GAGAGACATA GACAGAGATA GAAGAAGGGA AAGAGCGAGA AAGAGACTAC 
    CAAGGAGGCG TGGAAGCCAG GAAGAAGAGG CTTGAAGAAA TGTTGATGCG 
    CCATTTTCAA AATCTTGAGA AGTCCTAAAT GGCTAAATCT GAAAGTCGAC 
    GGTACAGTTT CTTGAAGGAA CGAGTGTAAT AAACTCCAAC TTGAAGATGA 
    CAGTTTATTG GTGTTGTTGA AACTATGAGA GACCATTGAT ATACTCAAGA 
    AGAGACCATT GAAGAGACTT TTATTGTGGT TAAACACTCT GGTTCGGTTC 
    AGGACTTTCA GAATT

AT4G00260.1

Model type
Protein coding
Short Description
Transcriptional factor B3 family protein
Computational Description
maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR