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53-4154-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 186999 [Map]; Strand: w
      • AT2G01422.2 - [+] show detail
        Distance: 2265; Region: intergenic
      • AT2G01430.1 - [+] show detail - homeobox-leucine zipper protein 17
        Distance: 799; Region: intergenic
    Flanking Genome Sequence: 53-4154-1 - 5-prime edge 
    GTCTTGATCA AGTCTGGTGT CTCGAAATAA ACACAAACTA GTTTTAGGCC 
    TCGGCCAAAT TTATTTGGTA CCGGACCGAA CCGAATTTAA CTAAGAGGTA 
    CCAAACCACT GAACTAGTCG AAGGCCCAAG TTATGATGGG CCACTAAATT 
    TAACGGCTAC AGTGTTTCGC GTTCTTATGA CTTAGATCAC AACATTAATG 
    CAACTATAAT TTGTCTTCAA AGAACACAAG TTTTCTTTTT TCCCCAAAAA 
    TCAACATATG TCATTTAGAA TTTAATTAGT TAAAAATTAG TTTATATACA 
    ATGTAGCACT CCCTACATTT TTTGGTAAAA TGTAAAGTAT TTATACCATT 
    TTTGAAATTG TGACAGAAAT TACAAGAAAC ACAAGAAAAG GAAAAAGATC 
    AAAATCTATA AAAAAAGATG ATAACAAAAC AGTAAAAGAG GAGAACGAAT 
    GTTTATAGCG AAAACGAAAG AAGAAACACC AATTCAGAGA AACTCAGAAA 
    TTCGCGTGAT TTCCACAACT CCAAAAAGCT GGAGTCCCAT CCTAGTTACC 
    GCGAGCAAAC TCTACCAGAG ACCAATACAA CGAACAAATT TTACGGGTCA 
    ATATGGGAGT AATAAACTCA ACAATTGAAT TTANTANACT TTTGTGANAA 
    TGATCTGANA TNTANTTTTT NTTAANANTN TCTTATGTTN TTTNAACANA 
    TTAANTGATA NGGGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 186883 [Map]; Strand: w
      • AT2G01422.2 - [+] show detail
        Distance: 2149; Region: intergenic
      • AT2G01430.1 - [+] show detail - homeobox-leucine zipper protein 17
        Distance: 915; Region: intergenic
    Flanking Genome Sequence: 53-4154-1 - 3-prime edge 
    ATCAAGACAT CAGACATACC CCTCTAGCTC ATTGGTTTGT TAAACCATCA 
    AGCGTCTGCT TAGGGAATAA TAAGGACGCT TTAGCTCTTT TGAGTTTTGA 
    GAAAATCACA GCTGTGATCT TTTCTTTTGC ATGGGACCAG AATCCAGATC 
    ATCGTGTCTT ACCATAAGAT TTGATCCATT GCGAGATATT ACATGTAACG 
    AACGAACATG CATATGTTTA TTATTATAAG CATATATATA TATGAAAAGA 
    GCATTGATCT TGTAGGTACG CCAAACTCGA TACGTTTCTA TCTAAGGGTC 
    TATAATTCTA TTTATATCAT CGTAATCTTG ATACTATAAT ATGTGTTTGA 
    ATGCTAGTTT ATTTGTAGTT AATGTAACAA ACAAAAAAAA CGATTAATGG 
    TGAGTGTGAC TCGTGCTCTC GTTTCTTCAG TCTTCGCCAT GTGATTAGGT 
    GTGTGTTAGA AAATATGTCG TTAATTATAA CAAATATACC CCCTCGTCCG 
    AAAATACTCA AATCTNCTAA ACAATATCCC ATGATTATTG ATTGGTCGTA 
    TCAACTATCA AGNAGTGTTA GGTCAAACTC TATTTGTCTA NAAAATAAAT 
    NTNTGGATCA NACATGATTG GGNNGGACAT ATAATNGAGT GTNTTATGCG 
    GGCGGAATAA TAATATATGA TCTTGGACGG GAAANGATNT ACANNNCTNA 
    NGNGCTNAAN CCATGANCCT NGGNGGGGNN G

AT2G01422.2

Model type
Other RNA
Link
InterPro Scan - TAIR

AT2G01430.1

Model type
Protein coding
Short Description
homeobox-leucine zipper protein 17
Computational Description
homeobox-leucine zipper protein 17 (HB17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 18 (TAIR:AT1G70920.1); Has 8030 Blast hits to 8017 proteins in 519 species: Archae - 0; Bacteria - 0; Metazoa - 5631; Fungi - 276; Plants - 1985; Viruses - 4; Other Eukaryotes - 134 (source: NCBI BLink).
Link
InterPro Scan - TAIR