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53-4158-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24214754 [Map]; Strand: w
      • AT5G60140.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-4158-1 - 5-prime edge 
    CTCAAGACCA TCATCATCCT CAGCAACATT ATCATCCTCA ACAGAATAAT 
    CATTATCAGA ATCGTCAGAA TCATCACTAT TAAGAACGAT AACATCATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24214638 [Map]; Strand: w
      • AT5G60140.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-4158-1 - 3-prime edge 
    GTCTTGAGGA TGAAGTAGAT GTTGAGGCTG AGGATGGTTA TGATGCTAAG 
    GATAGTGATG GTCTTGAGGA TGAAGATGAT GATGAGGCTG AGGATGGTTA 
    TGATGCTAAG GATGATGATG GTCTTGAGGA TGAAGATGAT CTTGAGGATG 
    AGGATGACGA AAGGCGGTAT CTGGATGATC ACGAGAACCC GTACTTTACT 
    ATGACACTCA ATCCGAAGAA GAAGAGCCAA TTGGTAAGAG AAAAAAAAAC 
    CTGAATATTT AAGATCTTTA CACACTCTCC ATTTAACATC TTTGGTTATG 
    GATTCTTATG TGAATAAATT AATAAGGAAT ATCTCAATCT GTTTTATGAT 
    GTTTGTTTCT TGATGCAGCA CATACCGGCT CATGTCATAA GGGACTATGA 
    CTTAACCTTC CCGGAGCGTA TAACAGTCGT GGACGAAATG GGAGCATTGG 
    AGAAAGCAAT CAAGATTCAA AAGAATGGTT GCATCTTTGT CAAGGGATTT 
    GGTAGTTTCA TCAGAAGGAA CAAAATGAAG ATGACTGACA AAATGATATG 
    CGAGCTTAAG AGGACTGGAG GTAATCTGGT TCACACCATC AAGGTCAAGA 
    TTATCAGCGG ATGATCTCTT CACTAAGCT

AT5G60140.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR