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53-4162-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 187397 [Map]; Strand: c
      • AT4G00430.1 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: 0; Region: exon1 (CDS)
      • AT4G00430.2 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4162-1 - 5-prime edge
    GGTACATCGG CTCAGTCCAC CGACAAGGAC TACAAAGAGC CACCTCCTGC 
    GCCACTGTTC GAGCCCGGCG AGCTCAGCTC ATGGTCTTTC TACAGAGCCG
    GAATAGCTGA GTTTATCGCT ACTTTTCTTG TTTCTCTACA TCACTGTTTT
    GACTGTAATG GGAGTTAAGA GAGCACCAAA CATGTGTGCT TCTGTTGGAA
    TCCAAGGTAT CGCTTGGGCN TTTTGGTGGC ATGATCTTTG CTCTTGTCTA
    CTGTACTGCT GGAATTTCAG GTAACCTTCT CTCGATTTTC CCATTTTTCT
    GTAATCTCTG TTTTGGTGGG TTCTCTGTTT TGGTTCTGCT TTATTTGCTC
    TGTTTTGTTT CTGAAAACCA TTATGTGAGT CCTCTGTTTT TGTTCATGCT
    CTGTTTGACC TAGAAAATGT AAAGGAACCA AAAACAGTTA TAAAGCAGGA
    AACTTTGGGT TCTTTTGATG CTTGGGCTTA TCTAGATCTG TATGTTACAC
    CAATTTTACT GTTGATTTCT CAGATAAAGC TCACATCTTT CTGTAACATG
    TGTTTGTGTT TGTGTGTTTT TAGGTGGACA CATCAACCCT GCTGTAACAT
    TTGGTCTGTT CTTGGCTCGG AAGTTGTCTC TGACCANACC NGGCCGCAAC
    CACCTNNC

AT4G00430.1

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
plasma membrane intrinsic protein 1;4 (PIP1;4); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.1); Has 10702 Blast hits to 10683 proteins in 2216 species: Archae - 88; Bacteria - 5147; Metazoa - 1472; Fungi - 442; Plants - 2512; Viruses - 2; Other Eukaryotes - 1039 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00430.2

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR