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53-4187-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24217364 [Map]; Strand: w
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: intron2 (CDS)
      • AT5G60150.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -618; Region: promoter
    Flanking Genome Sequence: 53-4187-1 - 5-prime edge 
    GTTGAAAGAG ATGGGTAATT CCTGAAGAGG AAGGATCTAA AAGTTTCAAT 
    AAACTAAAAA TCTACATATA ACCAAAAACA GAGAGAGAAG TGTATTTTTA 
    CCAAATCATC TCCGGAATCA TCAGGTAAGT ACACNTTTGA AGAACTTTGG 
    AAGACAATCA TCCACAGAAA TTCCTGTTCC AAAGCAAGAA AAAAATCAGA 
    ACATAGGATA GGTTATGTGA TTGGAGAATC AAGAACAAAC AATAGCATAA 
    AGATCTTAAC ATAAAAACAA GAGTCTAAAG AAGAAACCTC TGTTCATCAT 
    CTTCACCTCT TTGAAACCCT AACTCTTTTA GTGAAAGTGA AGGTGAAAAT 
    GGTTCTTGAA AATAGAAAAG TAAAAGAGCT TTGTTAATAG ATCTCCGATC 
    TTTTGGTTTG CTTTAGAGAT TTTGCCTTTT GTAGCATAAC ACAGAGACTG 
    TATTGTCTTC TAGGCTTATT GCTACAAATG GAAAAATAAA ACATGTGCTA 
    ACTACTTTTA CTTCAATGCT CCATGAACCG AACCGATATG ATTTTAATCA 
    AACCGAAAAA TATTATCCTA ACCAAACCAA ACCAATAAAG GGTGAACGAG 
    AATTTAAATT CAAATAATGG GCTTTAAAGT CCGGCCCAAT CGATTTGCTT 
    TAAATGACAT TATTAACCTG AGATTTAGAG AACGTTGGCC GATCTTNTTC 
    ATTTCAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24217248 [Map]; Strand: w
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
      • AT5G60150.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -734; Region: promoter
    Flanking Genome Sequence: 53-4187-1 - 3-prime edge 
    CTTTCAACAG CTTTTTANCN AAGTCGTTGC CTAAAAATGT AATTGTTAGA 
    AGCATTTATG GAAACATCTG GAAAGTGGCC GTTTAGGAAG TTTTGTGGTG 
    ATAGTGAGAG ATTTGTTATG GTTAATGGGT GGAAGACGAT AGTCAAGGAC 
    GAAGATTTGA AAGGTGGAGA GTTCTTAGAA TTTGAGTTTG ATGGCTCTTG 
    GTGTTTCAAT TTCTGTATCT ATGGTCGTGC AACGTGTAAA AGGCTTAGAA 
    GTTCAGTGCA AATCACGGTT CTTGATGACA ATGATGATGG TTTTAATGAT 
    GATCAAGATT ATGGGGAAGA AGTTAAATCT AGTGAAAATT TCATAGTTCT 
    TGATGATGAT GATATTAGTG ATGTTCAAGA TTATAATGAG GAAGATACAT 
    CTAGTGAAGA TATTACAGCT CTTGATGATG CTGATAATGA TGATATTAAT 
    GATGTTCAAG ATTATGTTGA GGAAGATACA TCTAGTGAAG ATATCATAGT 
    TATTGATGAT GATGATGATG ATGATGATGA TGATGATGAT GATGATCAAG 
    ATTATGGTGA CGATGATCAT GCTGATGTTG AGAAAGAAAG ATGGAGAGGA 
    GTCANAACAG AGAAAAAAAG ANAGGTTTAT AGAAACTTTT GTCTTGTGAA 
    GTTACCTGAG ACTGAGAGCA TCACTGTCTT TTTATTTTCN TGCGTATAAA 
    TTTTGATAGG TTCTTCTGGA GAGCATGACA GACATTTTCT GG

AT5G60142.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60150.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR