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53-4211-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23727365 [Map]; Strand: w
      • AT5G58740.1 - [+] show detail - HSP20-like chaperones superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-4211-1 - 5-prime edge 
    AATGACTTTG GATGAACATT TGGCGGCAAA GTTATGTACA TGTTCACTTC 
    TTCCAGGGTT TGATCCCACT CAAATACCTT TTGACCTATA ACCATCGGAA 
    ATCGAAGAAC ATTCAAACCA AATCTCGTGA AATGGAATCA GCTGAAATTA 
    GAGAAATAGA GCGAGGGGAT AGAGAAAGCG AGAAACCATT GTGAATGAAA 
    TCGTGTCTCT TCTCTGGCGC AAGCTTTCAT GGTGTAGCCA AAGTCCGTAT 
    GAGTCTTTTG CTTTCTTTGT TCTAACAAGG AAACACTACT TAGGCTTATA 
    AGATCAGGTT GCGGTTTAAG TTCTTATATT CAATCATACA CATGACATCA 
    AGTCATATTC GACTCCAAAA CACTAACTAA CCTTCTTCTT GCTTCTCAAA 
    GCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23727301 [Map]; Strand: w
      • AT5G58740.1 - [+] show detail - HSP20-like chaperones superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-4211-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    CGAAGTCATT CCACTGCAAA ATCCAGTCGA AACATATCGA AGTTGGCATC 
    AAAGGCAACC CTCCCTATCT CAATGTCAGT TTCTTTCGCT ATCTTTCAAT 
    GTTTTTGATC CGTTTGTCTC ATAAATCTGA GTTATTCGAT GTGGTATATA 
    TAACTCGATT CAATTGTCTA AATTTTGTCA ATTTTCAGCA CGATCTTAGT 
    GCTCCTGTGA AGACTGATTG CTCGTTCTGG ACTCTAGGTA CTCCATTTTT 
    TGTTTTTGTG TCTGTATTGG GTGCTTGTTT TTGATGGTTA GGTTTCTGTT 
    TTTAGACCCG TTCACTATTG CTAGAGAGGA TAAACTGAAC CTGGAAATGT 
    GATCTGAGTT TGGTATAAAT AGTGGGACAT ATAGTTTGGA ATGTGGAAAA 
    TTTGAGACTA ATGGAGGGAT GATGGAATGT ACAGTATATT TTGGGTTATA 
    TTATCAGCGT ATGTAAGTTA CTGGCATAGT TTTTTTAGGT TCATAGTCTG 
    GCACTGATTG CTAATCTGGA TTGTTATGTT TGATTTGGCA GAGGATGATA 
    TAATGCACAT TACCCTGCAG AAGAGGGAGA AAGGGCAAAC ATGGGCATCA 
    CCGATTCTGG GACAGGGTCA GTTAGATCCT TACGCCACTG ATCTTGAGCA 
    GAAGCGGCTC ATGCTCCAGA GGTTTCAAGA AGAGGNTAGC TACCTGGAAA 
    AGTCCTCTTG GNTTCATATG

AT5G58740.1

Model type
Protein coding
Short Description
HSP20-like chaperones superfamily protein
Computational Description
HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT4G27890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR