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53-4233-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26502249 [Map]; Strand: c
      • AT5G66330.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: -294; Region: promoter
      • AT5G66340.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -253; Region: promoter
    Flanking Genome Sequence: 53-4233-1 - 5-prime edge 
    GGGATAAACN ACAAAATCGG TTATACGATA ACGGTCGGTA CGGGATTTNN 
    CCATCCCCAA NACTAGTTTA GNATTNNGAC AACTNCTGGT CAAATGGGTA 
    CGNTCACATA TGGGAGAAAA TGAAATAAAT TGTAAAGTTT ATTAGTCAAT 
    TTATGACATG TGAATTGGTA ATATGTCAAA TAATCCTAAA TCAAGAGTTG 
    TTCTGCTTTG GAATCTCAAC AGAATCTCAA ACTCATAACC TCTGAGTTAT 
    GGTGGATGGG GATAGGGCCA ACCACACCTC ACTGTACAGA TGTTGTTGTC 
    TTCACGCATA TGTCTGATGG ACAATGACAC ACATGATATA AATTTACACT 
    ATCTATTTTA ATATCTCAAT CTCTCTATAT ATAAATTCCT CTGTCTTTCA 
    AGTTTCAGAG CAACTTTCAG TAGATCTATC ACACGCCTTG ACCCTCTCAT 
    CCAACGGTCA TTATTCACTC CAAACCCACT CTGCTTCTTC TTCTTCCAAA 
    CATCTCTCAG CAGAGCTAAC CATCTCTCTT TTGTAATGGC TTCACTTATT 
    TCCCTTGTTC TTCTTCTTTT GCTCACTTTA TCTTCAGCAG AGTCCAAGAC 
    TTTCTGGGGT GACGTGGCAG CTCTCAAAGA CTTCAAGAAC TCAGTGGATG 
    CCAAATCCAT GAGTCCAGGC TCTTGCCTGA GTTCTTGGGA TTTCTCCGTC 
    GATCCCTGCG ACAATATATT CAGCGACACA TTCACTTGTG GGGTTCCGCT 
    GCGACTCCGT CGTTACCGGA TCGGGGTCGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26502316 [Map]; Strand: c
      • AT5G66330.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: -361; Region: promoter
      • AT5G66340.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -186; Region: promoter
    Flanking Genome Sequence: 53-4233-1 - 3-prime edge 
    GTTGATGACA TAGATAGAAG AAGTAATTAT AGCCTTACAG GAAGCAAGGT 
    TGATGGGTTA ATGAATGTGC AGCTGTTGCA AGCAAAGGTT CCAAATCATT 
    GGCTCTAACT AACTTTAAAT CTATGGAAGA CGACGAAAAT GTTCATATAT 
    GATAGGATCA CTCATTAGCG TTAGGTGTCT AAAACTCTAA ACCTAAGCCA 
    TGTGGGACAC TAAATCATCC TAACGGGTCA CTAAGACTAT GCAGAGATTG 
    GTAAAACAAA AGGTACTAAC ATAATCTATT GGCACCATCT GAATTTGTTG 
    TCGTCCTTGC TTTTCGTCGG TATGTTGTTC TTAACGAATA ATTGTCTCAC 
    TGTTTCTTTG TTAATCTTGA ACTCAAAGAC CATCCCTATA ATAGTTAGAA 
    AGATGCACAA TTACAAAGCA GAAACTAGTG CTTACATCGA TCACGATACT 
    CTCTTCTCTG ACCTTCTATT TTCCTCTAAG CTGTGATTTA TGCTTATCCA 
    GATTACTATT GAAATCGTCN A

AT5G66330.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Computational Description
Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT2G15320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66340.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR