1. Home
  2. Mutant Lines
  3. 53-4238-1

53-4238-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24130645 [Map]; Strand: w
      • AT5G59920.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4238-1 - 5-prime edge 
    GGGATAAACT ACAAAATCGG TTATACGATA ACGGTCGGTA CGGGATTTTC 
    CCATCCTACT TTCATCNNCA TCCTANAGAT CCTAANGGAT CCTGANGATG 
    GTTCTGATGA TGGTCTCTGA TGATGNNTCT GANGAGTGTN TCTGATGATC 
    CTTCGTAATG ATGTCATCGT GATGATACAT TNTTGATGAT GATTNTGATG 
    TTGTCCNCTG ATGTGNGTNT CTNGATGATG CTTGCTANTG ANGATCNACG 
    ATGATNCGNC CGATGATCAC ACTGGCGNNT ATCTGCTCCC GATCATGTTT 
    ATCGAGTTAT TTGGGTGAAG AAATTTGAAC TTACGTTTTG ATGATAATGA 
    GTGGTTCTAT CTTGCTTGTA TTATTTCATT AGCGTTCCTA TTTCTCTTTT 
    TATTTCCAAG AACTGATATG TAATACATAG TGATTTTTGT TTTCTAATGG 
    TAAATGCTGG TTATTATATA TTATACACCA ATACTGAAAA AGTCACAGAT 
    GCACAGATTG ATCAAACCGG CATATAAGAG CATCAAAACG AATCATAAAA 
    CCAATGAAGA ACCTAAAGTA AATCAATGAA ATTACTACGA GATCATTCCC 
    TTCGTTATAG AAGTCTCTTG TATTTGCTTG TGTATAAATC AATGAAAAAC 
    AAAAGAAAGG TAGTAGTCTA AACTACCATT GAAGAAATCT TGCTTACACA 
    AACACAATGT TATTTGAGAG CATGCATGAT CACTTAACTT TTCTTTTCTT 
    TCAAACATAC CAATTTTGTT GCAAATACTT GAGAACATAC TCA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24130637 [Map]; Strand: w
      • AT5G59920.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4238-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATGAC 
    GGAGACCTTG CATCGAGAGT TACACTGGAT GCAAAATGGC CGAGTGTTGA 
    TATTGTTAGG AACCGCCTCA AACTCGATTT CTTTTTCCCC AAAGGAGTAG 
    ATTTGTCCTA GCACGAGACG TGAGAAATCT CCTAGTACGC ACTGAGCATG 
    CAAGGTGACT CCACAATCAT AACAAGTATA GAACCATATA CTTGGATCTA 
    ATTCCTTCTC ACAAATGTCG CACCAATATT TACCGGTCGC CTCTTCCTTC 
    TCACCACAAC ATAAAGTGAG AGGGTGCCCA TCGTTCCTAT GCCAAATCTT 
    TTCTGGTAAA GTAGCACAAT ACAAACACAA ATCAAAGTCA CAAGCT

AT5G59920.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Curator Summary
Isolated in a screen for UV-B insensitive mutants using a hypocotyl growth inhibition assay. Mutants are defective in a number of UV-B responses.
Computational Description
UV-B LIGHT INSENSITIVE 3 (ULI3); CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Zinc finger, PHD-type (InterPro:IPR001965), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR