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53-4244-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7952625 [Map]; Strand: c
      • AT4G13680.1 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4244-1 - 5-prime edge 
    CTCTCATCTT TGTCGTTGCA AACTGATTCT CAGACTCGTG TCTTGCTCTG 
    CGCTGATCCA TGTGGAGGTA ATCGGGGAAT AGCCATGACT ATGAGGTCTA 
    GTCGTTTTCT TCGAACCCTT TCTTTCGAAG GGTGGGAAGA GATGAGTGAG 
    AACGAAGATA AGATTTGTGC AGAGCTGCTC AAGGAAATGG GAGCGATAGG 
    ATCATGCGGT GGATGGCTAC CTACTTTGAA GGACGGCGTG TTGCGTCTCC 
    GAGAAGTGAA TCTAAACCAT GAAACGGATC GGAAACGCAT TTCGCTGCCT 
    CCTCTTGTGA CTCTGCCTCA TTGCCAAACA CAATATGTCA CCAACGTGGC 
    CATGTCTACG TCTTCCCCTG AAGAAGAGGA CTGTGTTGTG GCTGTCAAGT 
    TCCTGGGACC TCAACTCAGC TTTTGCAGAC CCGCTCAAAG CAATTCCGAG 
    TGGATCAACA TCAGAATGAC AGACCCCTGC TTCTTCTCCT CCCCTGTCAT 
    GTTGTCCAAG AAAAATGAGA TGTTGCGCAT AGCTGGCTCT GGAGGCCAAC 
    TCATCGGATC ATGGGATCTC CAAAACCATA GCAACAACCC CAAGTTGCAG 
    ATCTTGCGGT TTCAAAACCT TCCCAAGCTG TCCGAGACAA AACGAGAACT 
    TCTGGAGTCG TGCTACACAA GTGAACACTT GG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7952723 [Map]; Strand: c
      • AT4G13680.1 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4244-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCA TTANAAAGAT GAGGAGAGGA 
    TCTCACCAGC ACAGGTTTCC GAAAGCAGAG CTTCGGAGTG CTGATTGANA 
    AGCANAGACA TGAATAATGT TCTTAACGGA AAGCAAGATA GAAGAGAAAA 
    AAAAAACCCT ATTNNAAAAN TGGGGGATNT TNNCCCCCTA AAANTAAANC 
    CTTNANTACC TNGCTCCCCA NNTTTNTNNT NNCCAAANTN ANTNCCGGCN 
    TTNNNAANGG GTTNNAGTTT TNGAAAATNN TNTGGCCCCT TNGTNNTGGA 
    TTTNGGGTNT NTTTTTTTTT NGGGANGGGN NGNTTTTNGG NTTTTTGNCC 
    TCCCNTTANG GNAAANAAAN NTTNNTTTNN NTTTTTNCNC CCNANTTTTT 
    NGGNTTTTGG GGGNAANCNA ANCCCCNNGG GTTTTNGGGT CCCCCCTNNN 
    AATTTNNTTT TTTTNAANTT GGGGNAAANN AAAAAANCCT TNGGTTTTTT 
    NCCNTAAANN NCNNTTNGGG NNCCCNAAAA NNNNNAAANN NTCAANTTTT 
    TCCCGNNAAA NNGGNNAGGG CCTTTTTTNG ANCCCNNTTT TTTCNNNGTT 
    NTNAAGGCCN AGGNANNGTT CNNGGGGCCC ACCGGGTTTN AAATAAACNN 
    NATTTTTCGG GGAACCNGTG GANAATTNAT CCCAAANTTT TTTAAAACTT 
    TAATTGGCCC AAAAAAAAAA CCCNCCCNAA AAGGNTTTTC CANCTCCCAA 
    TTTNGGGGCC TCC

AT4G13680.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
Protein of unknown function (DUF295); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT5G55270.1); Has 197 Blast hits to 193 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 197; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR