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53-4248-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 610325 [Map]; Strand: c
      • AT2G02310.1 - [+] show detail - phloem protein 2-B6
        Distance: -195; Region: promoter
    Flanking Genome Sequence: 53-4248-1 - 5-prime edge
    GAAGATGTTG TCAAAAAATA TTGAACCGAC ATTAAACACA TTAAACAAAT 
    GTTTACAAAC AAAGAAAAAC GCATGAAACA CATGGAACGT GACTTGTGAG
    GAAAACGAAA ACACNGGGCN GTTGACTTAA TGGCCAAAGA AGGGCAGTTT
    CAATACGTGT GCACGGCTTT TTCTTATAGG TATTTAGCGT CGGAGACGAC
    TTTAGACGAG TCTTTAAATT CTTATCTTCG AATCTAAACG AAGAAAAACA
    TTACAGGTAG AAGCAACAAT GGGACAAAAA CTCGGCGTTG ACTCTAGACA
    AAAAATCAGA CAAGTTCTCG GTTCCTCATC CAAGGTGCAA AAACACGACG
    TGGAATCTAT CGGTGGAGGC GGGGGAGAGA TCGTACCCGG TCATTCGCCG
    TTTGATGACT TGCCGGAGGA TTGCATCTCC AACATAATCT CTTTTACAAG
    TCCACGGGAC GTGTGTGTCT CCGCTTCAGT TTCAAAATCC TTCGCACATG
    CGGTCCAGTG TGATAGTATA TGGGAGAAGT TTCTTCCGTC GGAGTATGAA
    TCCCTGATTC CTCCGTGGCG AGTTTTCTCA TCGAAGAAGG ACCTCTATTT
    CACTCTTTGC TACGATCCTG TTCTAGTTGA GGATGGCAAA AAGGTATTTA
    TATTTGTCCA TTTATCAGTT TACACTTTGT TTCTACATTT TGAGAATAAT
    GACCTGTCTT T
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 610441 [Map]; Strand: c
      • AT2G02310.1 - [+] show detail - phloem protein 2-B6
        Distance: -311; Region: promoter
      • AT2G02320.1 - [+] show detail - phloem protein 2-B7
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 53-4248-1 - 3-prime edge
    ACATCTTCTA CTCTTATAGC AAAGGTAAAA CTTAATTTTC GCAAAACAAT 
    TTATTTATTA TACCACACTC AACCGAAAAC ACTCTTTCAT AAATTGGAGT
    TTAACTCTTT ACTTCGTTGT AAAACTAATT GACAATAATA CCGGTTCATC
    AGGTAAAAGG GAGTTTAATT TCTAGGGCAT TTCATTACCG GGTTTTTTCG
    TAGGACGGAT TTCAATTCCT TGAATAATCA AGCCACGTTT CGTATTGCGC
    TGAGTAGTCT CTGAAACACT CATCTCAATT TCATCATTAT TCCTAAATGC
    TCCTTCATTA AAGAATT

AT2G02310.1

Model type
Protein coding
Short Description
phloem protein 2-B6
Computational Description
phloem protein 2-B6 (PP2-B6); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sperm cell, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 502 Blast hits to 484 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 498; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02320.1

Model type
Protein coding
Short Description
phloem protein 2-B7
Computational Description
phloem protein 2-B7 (PP2-B7); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B8 (TAIR:AT2G02340.1); Has 490 Blast hits to 475 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR