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Mutant Lines
53-4284-1

53-4284-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 26319450 [Map]; Strand: w
  - AT5G65780.1 - [+] show detail - branched-chain amino acid aminotransferase 5 / branched-chain amino acid tran...
    Distance: 638; Region: intergenic
  - AT5G65790.1 - [+] show detail - myb domain protein 68
    Distance: -3498; Region: intergenic
Flanking Genome Sequence: 53-4284-1 - 5-prime edge
```
NAAAANNNTT TNCCCGGGCA AAACTAACAA ANCGGTTATA CGATAACGGT 
CGATACGGGA TTTTCCCATC CTACTTTCAC TTCTTTTTTT TTATCTTTAG 
AATACTTCCA AAAAGAAAAA GTAAATGGAT C
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 23602169 [Map]; Strand: w
- AT5G58390.1 - [+] show detail - Peroxidase superfamily protein
  Distance: -844; Region: promoter

GTAGATGTAG GTAGTTTTGA ATATATTGGT TATATTTCTA GCTAATGAAT 
GCATTTTGTA ACTTCATATT TACAAGAGTT CAATACAATT ATTCCACAAG 
TCCTTTCGTA TTCTTAGTCT CATCAACTTA TCAATATATC ATATCCTTAA 
CACATGCTCA TGATGAATTT GGTTTTACCC AAAAACCGGT CTAGTTAATC 
TGATCCGAAA TTAATTTGAT CCATCCATCA CCTTAAGAGA ACACATATTA 
GAAATCCTAC ACTGAAAACA GAATGAGACC AAGGTAATTT ATCAATGGAT 
ATGGATCAAA CCCACTTACC AGCAATAGGT TTTGATAGGA AACCCTTCAA 
ATTTAGCATA TAAAACTTTA GATCGAACCA CTTTGGATTC AAATTAGATG 
GCACATATTC TACTACTTTA ATATCATGTA AAGATTCATT TGCTTTCAAA 
TCAAAACCAA TGTGTGGATT GATTAGTTAT TTTATTATCA CAACTTTGAA 
TTATAATTAC TGTCATCTAT CTATAACATA AACTAAAATA ATAATGTACA 
TTACTATATA TGTTTATTAT ATAGTATATC GCAAATCTTG ATATGGTTAT 
GGATATATCA AGTTTAATAA TGTATGCTCA CCTTAAAACG TATATACTCC 
CGACGAATAA TGAACATTAG AGTTTTAATT TGTACAATAA GATATGCTTG 
GAGAAACAAA AAGGGGAATG TGCTGAAAAA NGGGAATGT

AT5G58390.1

Model type: Protein coding
Short Description: Peroxidase superfamily protein
Computational Description: Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G65780.1

Model type: Protein coding
Short Description: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5)
Curator Summary: encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant
Computational Description: ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: branched-chain aminotransferase 3 (TAIR:AT3G49680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G65790.1

Model type: Protein coding
Short Description: myb domain protein 68
Curator Summary: Encodes a putative MYB transcription factor.
Computational Description: myb domain protein 68 (MYB68); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 84 (TAIR:AT3G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR