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53-4287-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5101456 [Map]; Strand: w
      • AT3G15140.1 - [+] show detail - Polynucleotidyl transferase, ribonuclease H-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4287-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACTGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCT TGGGTGTAAT ACAAGCACAT GGGTCTCCAC 
    CTTGCATTTT CACTTGTTTC CATTAACGAA AAAGTAGAAG GAGAAGAAGA 
    AGAAGAAGAA GAAGAAGAAG AAAAGTCAGA GGGAGAAGGA GATGGAGATA 
    CAGAATGCGA AGAGTTGCAC ATGATTCGTT TGGTATGAGC TAAAGCCAAC 
    GTGGCGGGAT AAGAGAACCG GGTATCACGG AAAGGACTGA TTCTGGACAA 
    CGAAACCCTA AATGCAGAGA ATGCGGACGC CATTTTCGTC GATTAGCATG 
    AAGATTGAAG ATGAAGATCT TCCTTTCGAG TACAGGGACT GGGAACTGGG 
    AAGCTAAAAG CCTTTAGTTT GTTTTAGTAA CCAATTAAAA TCGAACCAAA 
    AATTGAATTT GAAAACCAAA CTGGATTTAT ATCCACACAA ACTCTTAACC 
    AATGCCAAAC CATACCATGA AAAACTAATA AACCGAGTAG ACCTAATAAT 
    GGTACTAAAT CGAAAATTCT GACTACAAGA AATGAAATTA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5101467 [Map]; Strand: w
      • AT3G15140.1 - [+] show detail - Polynucleotidyl transferase, ribonuclease H-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4287-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ATTAATTTAC ACCCACGGAA AGTGTACAAA GGTAAACACT TTGCTACTCG 
    TCGTTCTTTT TAAATTTAGT TTTTGCTACA GCGGAATGCG GAATTAAATT 
    CCATTTCTTT ATTGATTGGT TCCTGCTCCG TATGCNTTGT TCGAAAACAA 
    GTGATGCGAA ATTTGTATCA ACTATGCAAT GTCTGCGACC TGTTCGATGG 
    AATGTCTGAA CGAGATTGGA ACTTGTTTAT TGTTTGTGTC TCGATCGTTA 
    CATTGTTATT CTTTACTAGT TTTTTATACC TAAATAATCG TGAATGATGG 
    GTAATAAAGT TTATGTTGAT GATATCAGAT GGATGATCCT GCCCATTTGG 
    AGATTTTTAA CCACGATTGT TCAAAGGAAC TTCGAGTGGC TGCTGCTGAT 
    CTTGAGAGAA AGAAGTCACA AGAATT

AT3G15140.1

Model type
Protein coding
Short Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Computational Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 576 Blast hits to 576 proteins in 123 species: Archae - 0; Bacteria - 44; Metazoa - 336; Fungi - 16; Plants - 80; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink).
Link
InterPro Scan - TAIR