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53-4291-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26385474 [Map]; Strand: w
      • AT5G65960.1 - [+] show detail - GTP binding
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4291-1 - 5-prime edge 
    GAGAAGATTG ATGGAAAGCC GACCGGGAGT TTTGGTCGTC GGATCCTCTG 
    GCGTCGGCAA GCGCACCCTC CTCTCTCGTA CGCGCTTCTC CCTCTCGGAT 
    CCGATTCAAA ATTTTGTTTT GCTCTAATAT GTAATCAATC ACAGGATTGC 
    TCTCTGTGGA ATTTGAGGAT TCATCGGAGT CATCATCTCA AACAGAAGTT 
    CATGGGTACG TCTAGTACTG AAGAATTTCT TACCCTAACA AGTTTCATCG 
    TTTGAACTCT TTTTTCTCTC TGTAAAATGT GGGCAGCTGG ACGATTAACA 
    CTAAGTATTA CACTGCGGAT GTTTCTGTAT GTATATCACA TATTTGCGAT 
    GAATACTCTC TACCCAATCT CCCTAACTCA CATCCACTGG TGGCGTTAGT 
    TATGGTCTTC GACTTGAGTG AGGTTTGACA TTGATGATGA TGATGATGAT 
    ACACGCTTCA TTCTTCTCAC CTTACCATCC CTGCATAACC CTTTTTTACC 
    CGATTCTTTG CAGCTGTCAA CCCTTGTTGC TCTTCAAGAC TGGGTTTCTC 
    ATACTGACAT CAACAGTTTT GATATATTGG TTGTGCATTG GTAACAANAG 
    TAGATCGTGT CCCTCATCAC CTTGCTCATG ATGAANATAA AACNGCGCCT 
    TTTGAAGGCA TCAGACCCCT CTAGAGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26385358 [Map]; Strand: w
      • AT5G65960.1 - [+] show detail - GTP binding
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-4291-1 - 3-prime edge 
    ATCTTCTCCA ACTTCGCCCG CCAGTGATCA AGATCCAATC TAAACAGATG 
    CTAATTCTGA TTTGTCGTCA AGTGAGAAAA GGCAAACCCA ACGTCAAGTG 
    ATAATTTGAA GCCCAAATAT CAAAAGGCCC AATACAACNG AAATATTGAA 
    TGTTTTATCT GCGTTAGCTT GACCATGTAT GGTCGTTTTA AACACACACA 
    CACTTTTTGC ATTGAAAGAA AAACAGTTGC CACAAAACAC ATCTCAAAAC 
    AGATTGTGTC CTAATCCTAT GTGTCTAGTT TGGGTTCTCC AAAAAATATC 
    CATTATTATC AACAACAGAA GGAAAAATGA AAATACAACA TAGGCGACAC 
    TTCAGGATCA AAATTTACCA AACTGATTCA ATATGTCTGT CTTAACCACA 
    TATGGCTGAA ACTGCATAGA CATCTGAAAA CCCAAGTCAT GCGAAGTTAC 
    ACTACTTGCT GGTAGAGATG GCTTTCTCGG CTTGTGGGGC TGAGGGAAAC 
    ACAAAGACAC TTGAAGCAAC CGCAGATGGC TGAAACTCAG CAGCATATCG 
    CGCTGATGTC AAAGTTATCT TTGGGAGTTG CTGTTCACCG CAAGTCAGAG 
    GCACTAGCTT ATAACTTAAG ACGTGTTCTG ACTTGGGAAG GACTGAAACC 
    GTATTGCTGT GAGACCCAGA CAGGACAAAA CTCTGTGCAT CAGCCAGACC 
    AAACTTTGCT TCTTGCAGCA ACTGTGTCTG

AT5G65960.1

Model type
Protein coding
Short Description
GTP binding
Computational Description
GTP binding; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial Rho-like (InterPro:IPR013684), Alpha/gamma-adaptin-binding protein p34 (InterPro:IPR019341); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR