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53-4292-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22229243 [Map]; Strand: w
      • AT3G60160.1 - [+] show detail - multidrug resistance-associated protein 9
        Distance: -39; Region: promoter
    Flanking Genome Sequence: 53-4292-1 - 5-prime edge 
    TGCGAAACCA AAGGGCTTGA ACATAGCTTC TTTCTTGGGT TGAGAAGACA 
    CGTGTCTTCG TACCGAGAGT CTAAGTGAGA AGCACTAGAG ATGATTGGAG 
    ACGATGAAGT TTCTGTTTTG TTTTCAGATG GAGTTGCAGG AGCCGGAGAG 
    AATGTGAGAC AAGTTTTGAG TTTATAGAGA AAAGTGATGC CAGCTACAAA 
    ACAAAACAAA NTNNTTTTTG AATATATGAT TGATAAGTTT GGGGACATTG 
    GAGAAAANCG GNCCNGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22229127 [Map]; Strand: w
      • AT3G60160.1 - [+] show detail - multidrug resistance-associated protein 9
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-4292-1 - 3-prime edge 
    GTTTCGCAGG TAAAGTTGTT ACTCTTTCAC TCGAAAAAAT GATATTTTTT 
    TTCGTTTTAC CTGATTGTGT TTGCTTTGAT ATGAGCAGCA GAAACTGGTT 
    CTCGTCTCCT GACGACGCAA TGGTTGCAAC TAGGAAACTC ACTTTGCTTG 
    AAGGAACGTA TAAGCATCGC TATGCAAGTG ACTTTCCTCG CTTTCTTTCT 
    TATTCATTTG GCACTTAAAT GGTTTGGTGT AGTAAGAAAC AGAGGATCTA 
    ATGATGTAGA AGAAGACTTG AAGAAGCAGA GCATAACTGT GAAGCAGAGC 
    TTCTCTTACA ACATATCTCT TCTCTGCTCT GTTTCTATCT TAGGGACTCA 
    TTGCTTTATC TTGCTTTTGC TGTTTCGAGA CAGCGTGGTC TCACGGTGTG 
    ATTCCTCTGT TTCTGTCTTC TCCGCTGAGG TTTCGCAGTC TTTCTCGTGG 
    TTGTTTGTTT CTGTTGTTGT GGTGAAGATC AGAGAAAGGA GGCTTGTCAA 
    GTTTCCTTGG ATGTTAAGGT CATGGTGGCT CTGTAGTTTC ATCTTATCCT 
    TTTCCTTTGA TGCTCATTTC ATTACCGCGA AACACGAGCC TCTCGGGTTT 
    CAAGATTATG CCGACTTGAC TGGTCTTCTT GCATCCTTGT TCCTGTTGGC 
    TGTTTCAATC ANANGCAAAA CCGGTTTCAT CTTCTTGATC CAGCGGTACA 
    CAGAGCCATT CTACTTGGTG ACCAACAGAG CANACAGAAG ATCT

AT3G60160.1

Model type
Protein coding
Short Description
multidrug resistance-associated protein 9
Curator Summary
member of MRP subfamily
Computational Description
multidrug resistance-associated protein 9 (MRP9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: integral to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 15 (TAIR:AT3G60970.1); Has 679468 Blast hits to 355652 proteins in 3947 species: Archae - 12543; Bacteria - 548953; Metazoa - 12500; Fungi - 7906; Plants - 6622; Viruses - 19; Other Eukaryotes - 90925 (source: NCBI BLink).
Link
InterPro Scan - TAIR