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53-4294-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24034752 [Map]; Strand: w
      • AT5G59650.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon13 (CDS)
      • AT5G59660.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -935; Region: promoter
    Flanking Genome Sequence: 53-4294-1 - 5-prime edge 
    AATACATTGC CTTGCAGATA TTACCGTACA AGTCGGTTAA CCGAGAAGAG 
    CGATGTGTAC AGCTTTGGTA TTGTGTTATT GGAGATGATC ACAAACGAAC 
    CCGTGATCGA CCAGGCCCGT GCAAAGACTC ACATAACAGA ATGGGTTGGG 
    TTTGAGCTAA ATAGTGGAGA TATTAGTAGT ATCATGGACC CAAACCTTCA 
    TGGAGATTAC GATTCTCGGT CTGCATGGAG AGCTCTTGAA CTAGCAATGT 
    CATGTGCAAA TCCTTCTTCC ACAAGACGAC CAAGTATGTC CCAGGTTGTT 
    ATCGAACTAA AAGAGTGTCT TGTGTCTGAA AACTCGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24050375 [Map]; Strand: w
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron12 (CDS)
    Flanking Genome Sequence: 53-4294-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTATGTAT 
    TCTTCAACAT TTAAAGGATA ATAAAAGTTT TTTCCAGCAC ATTTTGATGT 
    TAACTAACAA TACTTACTCG GGATCAAGGT ATCCAGGGGT ACCAACAATA 
    CCGTTGAAAC ATGAGAATCC CCTCCATCAG GGAAAGACCT TGAGAGTCCA 
    AAATCAGCGA GCTTGGCTTT GAACTGCTCG TCCAACAATA TGTTTGTAGT 
    TTTGACATCC CTATGAATTA TTGGTGGTAT GCATCCAGAA TGTAAATATT 
    CCAACCCTGT TCAATGGATT CATCTATTAT CATAAAACCC ATTTTTTGGA 
    AACTGGAAAA GTGTAAGAAA GAATCATTTT GTTCTATATG GTTTAAACTT 
    AATACTACAA ACCTAATGCA GCCTCCACAG CTATTCGTAG TCGAATACCC 
    CAGTTGATAT TGGATCTGCC TCCTTTTCCT GTATATTTAG ACCGTAGATT 
    AAGATCCATT TCCTAAAGTA TGTGTTTCAT GAGCTATTGG TACATGTGAA 
    ATCACTAGAA AATCTTATTT GCAAGTGTAC CAGACATATG TTGTCTTAAG 
    TTTCCATTGG GCACAAACTC GTAGATGAGA GCCAAGTGAT CTCTTTCGCC 
    ACAATATCCA ACCAGGCTAA CCAAATTTGT ATGGGGAACT CTCATAAGAA 
    GATCAACCTA ATCCATAAAA TTACACACAC GAAATCGTTA AGCTACTACT 
    AATGCTNTAG GTGATCACAA CTTCAATTCT AGCATACT

AT5G59650.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59660.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59680.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR