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53-4303-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23444210 [Map]; Strand: w
      • AT3G63480.1 - [+] show detail - ATP binding microtubule motor family protein
        Distance: -204; Region: promoter
      • AT3G63480.2 - [+] show detail - ATP binding microtubule motor family protein
        Distance: -204; Region: promoter
      • AT3G63490.1 - [+] show detail - Ribosomal protein L1p/L10e family
        Distance: 0; Region: exon1 (5UTR)
      • AT3G63490.2 - [+] show detail - Ribosomal protein L1p/L10e family
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-4303-1 - 5-prime edge
    CCCGCCACGC AGAGAATAAT AGCTCAGAAA GAATAGGGGG TGTTGTTATC 
    CCCTTGGGCG TGGAGTGGAT TAGGGAGACT CGCACTCTTC TTCTTCTTCT
    TTGTACCCAG AAAGAAAGAG AGCTCCAACA ATGGCTGCTT GCGCTACTCA
    CTCCTCTCTC ATGCTAGCAT ACGCCGCCGC ATCCACTCGT TCCCAGGACC
    TTACCCCTAC TCCATCTCTT TTCTCTTTTG CCAGCTCCAG ACCCAACCAC
    TTGAGCGTCC CGCTTCTTCT CCTTGGGGGT TCCAGGGACC GGAGATGTGC
    TGCTATTGAC AGAGCTTCCA ACCACAAGTT TATTGTCTCC GCCGTGGCCG
    CTGAGGCTGA CCTCGACACG GAGGAGGACC TGGAGCAGAC CGCCACCGCC
    GTCCTTGATC CGCCCAAGCC TAAGAAAGGA AAAGCCGCTT TGGTTCTCAA
    GAGAGATAGA GTATGTGCTT TACCTACTTC AATTTCGCTT CCTTTACTCG
    TGAATCATCA CTTTGTTTGC TTACCCATTG ACAGACAAGG TCTAAGAGGT
    TTTTGGAAAT CCAAAAGCTA AGGGAAACCA AAAAGGAGTA TGATGTCAAC
    ACTGCTATCT CTTTGCTTAA ACAAACTGCC AACACAAGGG TTGTTGAGTC
    TGTTGAAGCC CATTTNCGTC TCAACATCGA TCCTAAGTAC AATGACCAGC
    N
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23444094 [Map]; Strand: w
      • AT3G63480.1 - [+] show detail - ATP binding microtubule motor family protein
        Distance: -88; Region: promoter
      • AT3G63480.2 - [+] show detail - ATP binding microtubule motor family protein
        Distance: -88; Region: promoter
      • AT3G63490.1 - [+] show detail - Ribosomal protein L1p/L10e family
        Distance: -109; Region: promoter
      • AT3G63490.2 - [+] show detail - Ribosomal protein L1p/L10e family
        Distance: -109; Region: promoter
    Flanking Genome Sequence: 53-4303-1 - 3-prime edge
    GNGGCGGGCA CCTTAGCTAC CGNGTTCCTA GNGACACGTG TCTTCTTATG 
    GACCATTAGA TCTTTTAACA ACCCACACGC GTATCCTCGT GACCTCTTCT
    CCTTCTCCTT CTTCTTCTTC CTTCTCTTTT CTCAAAAATC AGATTTCGAG
    TTTCTTCTTT CCCGCCCGTA AGAGAAACCC TACTCTGACT CTCCACTCCA
    TTTGAGAGGT AAGTTCCGAT TCCTTTTCTC TCAGCTTCAA ATTTCCTGTG
    CTACTATTTC CCCAATTTCA TTCATCTTCT GCTGACTCAT TTTGGGTGTT
    TCACTGTAGA CTGAGCTCGT TCCGATAAGG AGAGGAGATG TCTAACGTAA
    CCGTCTGTGC GCGATTCAGG CCGCGAAGCT CTAAAGAGAT GCGCGATCCC
    AGCAGAGATG GTGTCTGTGC TCGACCCATC GACGCTGAAA CCTTCGTTTT
    CCAAGTTTGT CTACTCGACG CCGTGTGCTT GATTAATATT GTCTCTCTCT
    CTTTGTCTCT CAAACTCTAT CTAGCGTTTT TACTTGCGTG TAGGATGACA
    AGGAAGATGA ATTTACATTT AGCCTCGATA GAGTTTTTTA TGANGACTCT
    ACCCAAGCTG CGGNTTATGA GTTTCTGGCT CTCCCCATCA TGAGANGNAC
    TAATTGATTC CTTGATCTTC TCTTTTGGAT TTTAGATCTA AACATTTGAG
    CACCAATCTT ATGATTTTAC AAT

AT3G63480.1

Model type
Protein coding
Short Description
ATP binding microtubule motor family protein
Computational Description
ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein 1 (TAIR:AT4G14150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63480.2

Model type
Protein coding
Short Description
ATP binding microtubule motor family protein
Computational Description
ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein 1 (TAIR:AT4G14150.1); Has 10148 Blast hits to 9733 proteins in 305 species: Archae - 0; Bacteria - 0; Metazoa - 4474; Fungi - 1347; Plants - 1834; Viruses - 0; Other Eukaryotes - 2493 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63490.1

Model type
Protein coding
Short Description
Ribosomal protein L1p/L10e family
Computational Description
Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, bacterial-type (InterPro:IPR005878), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42710.1); Has 9168 Blast hits to 9162 proteins in 2816 species: Archae - 276; Bacteria - 5341; Metazoa - 152; Fungi - 277; Plants - 105; Viruses - 0; Other Eukaryotes - 3017 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63490.2

Model type
Protein coding
Short Description
Ribosomal protein L1p/L10e family
Computational Description
Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: chloroplast thylakoid membrane, ribosome, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 3-layer alpha/beta-sandwich (InterPro:IPR016095), Ribosomal protein L1, bacterial-type (InterPro:IPR005878); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR