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53-4309-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21189108 [Map]; Strand: w
      • AT3G57260.1 - [+] show detail - beta-1,3-glucanase 2
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-4309-1 - 5-prime edge 
    CCTGGATCGT TATCAACAGT GGACTGGGCG GTGAACAGAG CGTAGTCTAG 
    ATGGATGTTG GCCGTGTCTC CCATGTAGCT GAAGTAAGGG TAGAGATTCA 
    CGAGCAAGGG AGATTGCTTG CTTGCCAAGA AACCTATCAC TGGTTCGAGA 
    AAGCTCTTAT ACTCATCCCT GAACCTTCCT TGAGACGGAG GAGACGTATC 
    CGTGGTGGTG TCAGTGGCTA TAGCTGTTGA GACCTTGACT TCAAGCCCTG 
    CTCCAGAAAC CGCGTTCTCG ATGTTCTGCA TTGCTTGTAA GAGAAACCCC 
    CCAACTGAGG GTTTCACCTC ATTTCCAACG TTGATGTACC GGAATCTGAC 
    ACCATCTCTG TAGCTCTGAA CGTTTTCTTG AACCCACTTG TCGGCCTCCG 
    TTTGACTGGA GGCGAGACGT TCAAGATCTG AACTGGGAAC GTCGAGGATG 
    AGCTCGATGT CAGAGCCACG GAGAGCGGCA AGAGCGCCTG GGTCAGGGCC 
    GTAGAGCCGC ATTCGCTGGA TGTTTTGTTG TTTGTAAAGA GCCACAACGT 
    CCGATGGACT TGGCAAGGTA TCGCCTAGCA TCCCGTAGCA TACTCCGATT 
    TGTCCAGCTT CATTTTCCAA AATAAGAATC ATTAAATTGA ATAAATTTGT 
    GAAGATGGAG ATGATTAATA GATGTTACAA TAGCTTAAAA GATGACT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21188992 [Map]; Strand: w
      • AT3G57260.1 - [+] show detail - beta-1,3-glucanase 2
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-4309-1 - 3-prime edge 
    GATCCAGGGT ACTCATACCA AAACCTATTC GACGCAAATC TCGACTCGGT 
    TTATGCAGCA TTGGAGAAAT CAGGGGGCGG ATCGTTGGAA ATCGTGGTGT 
    CGGAGACCGG TTGGCCCACA GAGGGAGCAG TCGGGACGAG TGTGGAAAAC 
    GCAAAGACTT ATGTTAACAA TTTGATACAA CATGTGAAGA ATGGATCACC 
    GAGAAGGCCA GGGAAAGCTA TAGAGACTTA TATATTCGCT ATGTTCGATG 
    AGAATAAGAA GGAACCAACG TATGAGAAGT TTTGGGGACT GTTTCATCCA 
    GATCGACAGT CTAAGTATGA AGTTAATTTC AACTAATCCT TAGAGACTTG 
    TGGGCTTTTT ATGTAAGCGT ATTTAAAAAT TGGGAACTTG TTGTAGTAAT 
    AAGGAATAAT TAATGCGCTT TCAGCGTGTA GTATGTTGTT ATTTTTAAGG 
    TTATAAATGA GCTGCAAGCA TAAATAAGGA AAAAAATCAG CATGGGCCTA 
    TAGGCCCAAT AATAAAACAA GCT

AT3G57260.1

Model type
Protein coding
Short Description
beta-1,3-glucanase 2
Curator Summary
beta 1,3-glucanase
Computational Description
"beta-1,3-glucanase 2" (BGL2); FUNCTIONS IN: glucan 1,3-beta-glucosidase activity, protein binding, cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: systemic acquired resistance, response to cold; LOCATED IN: apoplast, cell wall, vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 3 (TAIR:AT3G57240.1); Has 2232 Blast hits to 2218 proteins in 176 species: Archae - 0; Bacteria - 18; Metazoa - 3; Fungi - 79; Plants - 2105; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Link
InterPro Scan - TAIR