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53-4328-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24211543 [Map]; Strand: w
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon10 (3UTR)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon10 (3UTR)
    Flanking Genome Sequence: 53-4328-1 - 5-prime edge 
    GCCCTGAGGT TGGAATAAGT TGGAAGGCCA GCCAAAACGA CGCTGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24211479 [Map]; Strand: w
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon10 (3UTR)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon10 (3UTR)
    Flanking Genome Sequence: 53-4328-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TGCTCAGGGC TGTGTAGAAC CTGCACGTTC ACATACAAAG TATGTTATTA 
    CGTGTAGTAT TGTAGGATCT TAGGAAAACT ATTGCCTCAA ATATGTGTTT 
    GAGATTGACA GAGAAGCAGA AAACAGGAGG GTGATAATAC TACACAACTT 
    TGGAACTCTT CCTTAGTCTT CTTCTATTCG CTAAGCATTC ATCATACTTT 
    TCATGTTTCC ATCAAGATTC ATATGAATAC AAACATCTCA AACTCTTTTT 
    CTTTAGTGGT CTTCTATCAA AATTTTTTTT TTTTNTTTTG GNATGGAAAC 
    CGNACCGTTT ANCGGGANNN GGAACCNCCN NTTNGGGGNC NGNCCCAANC 
    AANNAGTGNA NNGTNGTGGT TCCNAAAAAN GNNTNCCNTN GNNTTTTCCG 
    GNGNANGGNG NAACNTTNGG GGGGGGTNGG GGNNGGTCNA NNAAATNGGG 
    TGGGGNCNNA AATTNNNANN CAAAGGGGGG GNNANNNNAA AANCNGGCCT 
    NTTNNAANTG GCCAAAGGGC TGAAAAGGAN AANAANTACN TGGGGTTAAA 
    GGNGGCCGNN TNCCTAAAAG GGAAAANCCN GANNAGNCGG CTTTNNAAAA 
    CAGGGGNGGG GCTNNANNTG TTCCGGGGGN CCCCCCGGGA NGNNTANTCC 
    CCTNGCCNNG NCCNGGTTGG GAAGNTCNAN CCGGGGCCGN NAACNCGNNN 
    NCCCNNNAN

AT5G60120.1

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.1); Has 5042 Blast hits to 4634 proteins in 238 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 0; Plants - 4961; Viruses - 7; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60120.2

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.2).
Link
InterPro Scan - TAIR