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53-4362-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 9570541 [Map]; Strand: c
      • AT3G26160.1 - [+] show detail - cytochrome P450, family 71, subfamily B, polypeptide 17
        Distance: -655; Region: promoter
      • AT3G26165.1 - [+] show detail - pseudogene, cytochrome P450, potential frameshift mutation; blastp match of 4...
        Distance: 0; Region: exon2 (NonCoding)
    Flanking Genome Sequence: 53-4362-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTGG GATGACACAT AAAGATATCG ATACTGAAGA 
    AGTTGGCACT CTTACAATCG CCAAGAAAGT ACCACTAAAA CTTCTTCCAG 
    TTCGATTTCA GTGGTCAAAC CAAACTCCAA ACTTTGAAGA TGTTTTGAAT 
    AAAAATACTA TGCAAAGTAT GTAACCCTAG CTTCTCTAAT GTATGTGAAG 
    TACGTTTTCC AGTAAAATAC TAGTTAAAAC TTTCATATCT TTACTAAAAC 
    ATGTACCTGT GTTTACTGTG TTTCATATCT TTGGAAAATA ATTATAAATA 
    AATTTTTCTA GACATCTTTC TTCTTTAATA ATAGTATTAG TATTTTTTAA 
    AAATTTAAAA TACATTAGCT GATGAAAGTA TACATAAAAA CTTTAAAATC 
    TATCTATTTG AAACAATATT AATAAAACAT GGATTAGTTA GGAACAGAGG 
    AGATATCAAC TTTGTATCGT AGATGTTCCT TAATCCTTAT ATTCATATTC 
    ATACTTTCAC ATGTCAAATT TATTTTCCAG ATGTTGAAAA CATGTCAAAT 
    TTCTTAACCA GATGTCGAAG CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 9570539 [Map]; Strand: c
      • AT3G26160.1 - [+] show detail - cytochrome P450, family 71, subfamily B, polypeptide 17
        Distance: -653; Region: promoter
      • AT3G26165.1 - [+] show detail - pseudogene, cytochrome P450, potential frameshift mutation; blastp match of 4...
        Distance: 0; Region: exon2 (NonCoding)
    Flanking Genome Sequence: 53-4362-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTAATCCCAT CAGGCAACTT CCAGTCGAAG AAGTAAAGTA AGTTCAAGAG 
    TCCCAATTCT ACAGTAGCCA TCCCCATCGA TATCCCGGGA CATATCCTTC 
    GTCCAGACCC AAACGGTAAG AGCTCGAAAT GTTGTCCCCT ATAATCCACA 
    GGACTATCGA TAAACCTCTC AGGGTCAAAC TCTTCCGGGT TTGTCCAGAG 
    TTTGGGATCT CTTCCTATCG CCCAAGCGTT GACCAAGATC CGTCTCTTGG 
    GAGGAATATC ATAGCCTTGA ACCTTGATGT GAGCCATTGT TTCCCTTGGG 
    AGAAGAAGAG GAACTGGATA GTGTAATCTG AATGTTTCCT TGATCACTAG 
    GTTCAAGTAA GGAACTTTAT TGTTATCTTC TTCGGTGATT CTCTCTTTAT 
    TTCTGCGAAG GCGGTCTCGG ATCTCGCCTT GAACTTTCTT CATCACTTCC 
    GGGTTTCTAG CGAGCTCCGT CATTGCCCAT ATCATAGTAA GAGCTCCGGT 
    GTCTATCCCT CCGAGAAATA TATTCTAGCA AACACACGGA AACTAAGTTA 
    AATATCAAGA TTCAGTTTCA ATGTGAATGT GTTGAAACAA GTTAAGCT

AT3G26160.1

Model type
Protein coding
Short Description
cytochrome P450, family 71, subfamily B, polypeptide 17
Curator Summary
putative cytochrome P450
Computational Description
"cytochrome P450, family 71, subfamily B, polypeptide 17" (CYP71B17); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 16 (TAIR:AT3G26150.1); Has 33070 Blast hits to 32831 proteins in 1676 species: Archae - 44; Bacteria - 3139; Metazoa - 12047; Fungi - 7115; Plants - 9587; Viruses - 3; Other Eukaryotes - 1135 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G26165.1

Model type
Pseudogene
Curator Summary
putative cytochrome P450.
Computational Description
pseudogene, cytochrome P450, potential frameshift mutation; blastp match of 49% identity and 5.6e-119 P-value to GP|16507125|gb|AAL24049.1|AF426451_1|AF426451 cytochrome P450 {Citrus sinensis}
Link
InterPro Scan - TAIR