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53-4393-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24810652 [Map]; Strand: c
      • AT5G61740.1 - [+] show detail - ABC2 homolog 14
        Distance: 0; Region: intron10 (CDS)
    Flanking Genome Sequence: 53-4393-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCGA CTCACACATA AACATGTGTA TTCGTTCTTC 
    AAGGTATTGA TTTTGTTAAC TTACCGGGGA ATGTGGGAGA TTCAAGCAGT 
    TCACCAAAGA GAAACATTCC CAAGAGCCCA CTTGCAAACA CCAATGTATA 
    AGCAACAACT ACAATTATAA GCCGATTTTT TTTTATCATG AAGCCGTTGA 
    TATATAACAT ATTCGTGAGA TGATTCAAGA AATGTGATGT TAGTACCTGT 
    TGCAGTCTTA ACCTTTGAGA ATATGGAAGA AGCTAAAAAG GCGAAGGAGA 
    TTTGCAGATT TACGAAGATA AAATAGAAAA TGAACTGGAC GCTGTAGTCA 
    TTGAGCCGGA AGTACCTGAG TCCTATCGCT GAACCGANGA TCACCCNNGA 
    AATANCNTAA AACATNNATN GAGTNNGAAA ATAGGCNTTG GAAATNATNC 
    AATATGGACC AATGCCTTGC CCGGGNNTTT NNNTTNTAAT TNTTANGCGC 
    TNTTNNTTTT TNTTCACCNN NGNNGGGNNN GAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24810825 [Map]; Strand: c
      • AT5G61740.1 - [+] show detail - ABC2 homolog 14
        Distance: 0; Region: exon11 (CDS)
    Flanking Genome Sequence: 53-4393-1 - 3-prime edge 
    TTTAAAGNGA CGAGGTATTT TACTNGACCG TTACCGACCG TTTTCATCTT 
    NTACCTCATG TCTGTGGAGT GGTNTGTGAT TCTCATTGTG GCCTACTCTA 
    TCGATCTTCT TTCTTCATCA GGGAGAAGCC CTTTCGTTTT CTTCAAGAAA 
    TCATCTTNCC TACCAAGTCC TAGTGTTCAA AGGCAAAACT CTGAAAACGT 
    TCTCATTGAC ATGGAAAAAA CAGATGTCAC TCAGGAGGTA TGAAAAACAA 
    AAATCTTATT TTCTTTCCAT GTGACTCCAA CTTCAAGTCG TTCTGATAAA 
    AATTGAAAAT ATTCAGCGGG AAAAAGTTGA GAAATTGAGG AAAGAAGGGA 
    CCACGGGGCA TGCGATCGTG TGTGACAACC TGAAGAAGGT GTATCCAGGT 
    NGCGATGGTA ACCCGCCAAA GCTNGCAGTA AGAGGGTTAT ATCTCGACGT 
    GCCTTCAAGA GAATGCTTTG GCATGCTTGG ACCTAATGGT GCCGGAAAAA 
    CCTCTTNCAT CNNTATGGTG AGTTTTTGCA ANACCACTNT TCTTACTCTA 
    AATTNGCGTT TCAGNGGTTG AGTTTTGGGG ACNTTNGTTT CTGCTNGCGC 
    TNNGATGACC TGGGGCTCCC TGNANCCCAA CATTCTGGNA NCNTGCGGTG 
    GGTCGAGGNN TTGGACGTTT NNCAAAGNTN NTNANCAAGA GNTNNNNNCC 
    ANNGGTNGNG AGGNCNNNCC CGCNACNTTG GAGTAGGGTA ACNANTTTTA 
    TNNGAATGNC TTNTAGCCAT NCAAATTANT GAANCAATTG GATNGCGNTG 
    GGANGCTNGT GGNTTTTTNG NCCGGGACNA GNAGG

AT5G61740.1

Model type
Protein coding
Short Description
ABC2 homolog 14
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 14 (ATH14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 16 (TAIR:AT5G61700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR