1. Home
  2. Mutant Lines
  3. 53-4398-1

53-4398-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18954747 [Map]; Strand: w
      • AT5G46710.1 - [+] show detail - PLATZ transcription factor family protein
        Distance: -55; Region: promoter
    Flanking Genome Sequence: 53-4398-1 - 5-prime edge 
    CCAATGTCGA CAATGTATAA TATTTCCGAA CCTAATCCCG AACCAGCCCC 
    GAGCCTAAGA AGAAGCNGTT GGGTTCAAGG AACCCTCTTG GAATTTTCTA 
    ATTTTATTTG ATTATTTCCT TTTTTTTTGG TATTTTAAAA ATATCTTTCT 
    GTCCTTCTTT GGTCTTATCT CTCTCTCTTT CACTATTATT TTTCCACCAA 
    AAATATTAAT CAATTTCGTC AAATTTTATT CCTTTTTTGA TTTTTCTTTT 
    CACAAAAAGT ATGTATTATA AACTATTATA TAGTCATCAC ATTAATTGGT 
    TGNGAGAGAC TTATAACTAT TTCCATTTTC CATTGCTGAA AAGTTCTGAT 
    ATTTTAATAT ATTTTTAAAA AAGTATATTT ATTGNGTTTA NAAAGTTCTT 
    GCTCCATTAT TGCAATTTGA TATCTCATAT CTACCATTTG ATTTAGNGTT 
    AAAATAAAAA TTTGACAAAA GGTCTTCAAT TTACAAAAAC TAGATTTTAG 
    CATTTTATTA AAAATATATA TTTTTATCAT TCGCCATATC AATAAATTCT 
    CGTAAAATCA AAACACTATG TCTCATGCAT AAACTTAGTC GGTTCAGTTT 
    ATTTANATCG GGGTAATCAA TTTTTTGGTT TATTCGGGTT AAAACTTTGT 
    TATCGAAATA GAAAATAGTT GAAATTGGTT ATAAAAAAAA AAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18954631 [Map]; Strand: w
      • AT5G46710.1 - [+] show detail - PLATZ transcription factor family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-4398-1 - 3-prime edge 
    GACATTGGTA GGATAAGTAG GACTCTTTCT CATTGCTTTT CGCTTCGTCT 
    TCTTCTCTCT AAAACTCTTT CTCTGCAAGA AAACCAATCT CTCTCTCTTT 
    CACTTTCTTA AACCCTTTAT CTCTCTAAAA CCCTCCTTTT TAGGTAAAAA 
    AGTTTTGGTG CTGACTCAAA AAAGGTTCGG TCTTTTACTG CATTTTGAAA 
    TGGCGATTGA AGATTACGAG AACCCAAATC GAGAAATCAA ACCTAAGAAC 
    AGAAGATTCA TGGTAAGTCT AACCATAAAC CCTTTTCTAC ATTATCACAT 
    TGTTGAAACT CTGTTTTCTC ATTGTTATAT CCTCTGTTTA CATTGTATGC 
    CCTTTGTGTT CATACGAATC TTCTACTCCT TATTTTTCGA TTCTAAGATA 
    TGGGTTTTGA TTGAATTGAG ATTTTCCACT AGAAACAAGA GAGTTTTGTG 
    GATTTTCCCT AATTTTTGTT GTCAGATGGT CAAATTCGAG TACATATTGA 
    AAATGCTCTG TTTTGGTGTA AAGAACAATA CTTAATTTTC TAATGTCACA 
    AAGAACAATG CTTGAATAAT GTAGTTGGTA GATTAGGGTT TTAAATTGGG 
    GGAAAATGTT GAAGAAGAAG AAGAATCTTG TGATAAAAAA TTAGGATCTT 
    TATCGAACTA NATTCACGGC TTAATATTCG ATTCCGTACT TATCGCCCTT 
    CAAATTTGCT TCTGT

AT5G46710.1

Model type
Protein coding
Short Description
PLATZ transcription factor family protein
Computational Description
PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT4G17900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR