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53-4404-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4500123 [Map]; Strand: c
      • AT3G13730.1 - [+] show detail - cytochrome P450, family 90, subfamily D, polypeptide 1
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 53-4404-1 - 5-prime edge
    CCTCCAAGAC GTCTCCAAGA CTGTCAGTAT ACTTATCCCT TAATTTAATA 
    TTTTCTTACA AAAGTTCTAA ATAATCCAAT AATCCCTTTT ATATATGAGT
    TAAAGCATTG ATTAAGAAAT TAAAAGGGAC AATCATAATA ATGTTACCAT
    AGAAATATTA ATCTATTTTA TAGAACATGG TTACAATTAT TACATTTGAT
    ATAATGATTA CAAATATTCT CTTTCTAATT TGTTTAACAA ATACTAATCA
    TTACCCTTTC AGTTTTTTTT TTCCTTCCNG GCNTTAAANA ATTAAATTNA
    TTTNATTTNA NCNGGTNGGT NGCNTTCAAN GTNCTNGCCA NGGCNTNGAT
    AAGNGTANAN AANGGANAAN ATTTANAANA GCTAANGANA GAGTTNGAAA
    ATTTCNTNTC AGGACTCANG TCNTTNCCAA TTAACTTCCC NGGAACGCAN
    CTCCNTANAT NTNTCCAAGC TAAAAANANT ATGGGGANGC AGGTNGAAAN
    AATCNTANAA GGCAAAATTN GGAAAACAAA GAACAAGGNG GAAGATGATG
    TTATTGCAAA GGATGTTGNG GATGTGTNGN TTAAGGACTC AAGNGAACAT
    TTAACTCACA ATTGGATGGC TAACANTNTG ATCGACNTGA NGATCCCTGG
    CCACNAATTN TGGCCCTGNC CTNATTACCC TTGCNGGNAA AATCCCNNNN
    TGATNCNCCN G
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4500239 [Map]; Strand: c
      • AT3G13730.1 - [+] show detail - cytochrome P450, family 90, subfamily D, polypeptide 1
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-4404-1 - 3-prime edge
    CTTGGAGGAG AACAGGTTGG TCCTCGGACC ATAGATCCAT GGATTCCGAC 
    AAAAACTTGT GCATGTCTCT AACGATTTGA GCTTTGAGAA GTGGCGACTT
    TAAGAAAGAA CCGACTAATC CATGGAACCG TCTATGTAAA CTCCCGTTGA
    TAAGAAGTAT CGACGATTTT CCCATTAGCT CCCTTACCGT TTTTGGGTAA
    AACGGCACGA AAGCTGTCGA GTCGCTCTGT AAAACGGCTC TGTTCACTTC
    AGCATCCGTC GACACGATCG TCGCCGTTCC AAAAATATGC GACTTAAACA
    CTCTCCCATA CCTTTACATA CATAAACACG TATATTTAAT TTATTAGTTT
    TAGATTAAGG AACACGTATA GAAAGAGGGA TAAGAGTTGT TACATGAGAC
    GACGCTTGTC CATGAAACTC TCAGGACGGT CTGAGTAAGC AGAAGAGACG
    AACTCGATGG TTTCACCGAT GACGGGCCAT CCCAAGCTNC CAGCCCNGGC
    NGTAGANCAC GCNGNCCNCC TTNTNNAGNC CANTCTGNNN NTNNNTNNNN
    TGNGNNTGAN NNGANTNTNA NAACTTANNC CNNNCNCTGN NNTTANAAGC
    CTNANNNNNG NNNNNCTTGN TNNANACNCN NNNNCCNNNN ANTNNTNTGG
    ACTNTGGNTC NNNNTGAAAG NTCCNNNCCN GGCCNNNANC CCCT

AT3G13730.1

Model type
Protein coding
Short Description
cytochrome P450, family 90, subfamily D, polypeptide 1
Curator Summary
Encodes a cytochrome P-450 gene that is involved in brassinosteroid biosynthesis, most likely in the conversion step of teasterone (TE) to 3-dehydroteasterone (3DT), and/or 6-deoxoteasterone (6-deoxoTE) to 6-deoxo-3-dehydroteasterone (6-deoxo3DT); or the conversion of cathasterone (CT) to TE, and/or 6-deoxocathasterone (6-deoxoCT) to 6-deoxoTE. Recently, CYP90D1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates). Member of the CYP90C CYP450 family. Similar to Cytochrome P450 90C1 (ROT3).
Computational Description
"cytochrome P450, family 90, subfamily D, polypeptide 1" (CYP90D1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: stamen development, petal development, leaf development, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT4G36380.1); Has 27722 Blast hits to 27661 proteins in 1582 species: Archae - 80; Bacteria - 4717; Metazoa - 10119; Fungi - 4209; Plants - 7293; Viruses - 6; Other Eukaryotes - 1298 (source: NCBI BLink).
Link
InterPro Scan - TAIR