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53-4431-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 10720820 [Map]; Strand: c
      • AT3G28590.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 2138; Region: intergenic
      • AT3G28600.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -1617; Region: intergenic
    Flanking Genome Sequence: 53-4431-1 - 3-prime edge 
    GTTCCAAGGA CGTGTAGTGT AGCAACGCAT AAAACAGTTC AACACTATTA 
    AAAATGTGCG TAAATAAGTT AGTTCATGCA TACATATTGG ATACTGTTAT 
    CCTATACGTG GTTTTGTCGG AAAACGTACA TAAGATGTGA CCACNGTTAA 
    CATAGAAATC AAATTGTAAT GATTTACTAA GAAAGAGTGG TGTGAAATTG 
    GCTTTTCAAA ACACGCTCGA CAAAGCGTTC ACATTACACG GTTCTTTATT 
    TCGACAAACA CATATTTACC TTGTTCCATA AGTTGTGGGA ATTTCCGACA 
    TACATAAGAT GTGACCACAT TAACATAGAA ATCAAATTGT AATGATTTAC 
    TAAGAAAGAG TGGTGTGAAA TTGGCTTTTC AAAACACGCT CGACAAAGCG 
    TTCACATTAC ACGGTTCTTT ATTTCGACAA ACACATATTT ACCTTGTTCC 
    ATAAGTTGTG GGAAAAATGT GGCCAAAACT ATAATATATG TATATTATAT 
    ATATTTTATT TAAATAGATC CGATTTTGAA TACCGAAAGA AGATCACATG 
    AAGATAGATT GGAGAAGGAA AAAGACANGA ATGAAAGCTA GGAAACTCCG 
    AAAAAGTAAA GTTACGTATA GCTTTTTAAT CATAAAGCT

AT3G28590.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79170.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G28600.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28610.1); Has 21037 Blast hits to 19726 proteins in 2862 species: Archae - 1274; Bacteria - 7399; Metazoa - 2914; Fungi - 2841; Plants - 2424; Viruses - 34; Other Eukaryotes - 4151 (source: NCBI BLink).
Link
InterPro Scan - TAIR