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53-4450-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23779927 [Map]; Strand: c
      • AT5G58890.1 - [+] show detail - AGAMOUS-like 82
        Distance: -905; Region: promoter
    Flanking Genome Sequence: 53-4450-1 - 5-prime edge 
    GTTGTTGTAC TACTTATCCG TTGTATGCCG AAAAACTTTC TCGATTCGAT 
    TCGTTTTTTA TGGATATGGG TAGCTTTAGG TTGTAATATG TTTCGCTAAT 
    ATAATCTTAA CATTAAAACA AAGAAGAAAA GAAGAGAAAT GAATGCTAGT 
    AGTTCTTCTG TGAGTATATA TTCAAAAGAT TTATCCATCT CTATACAGTA 
    TATTACAAAA GAATGAGTTG CCTTTACAAG TTGTATAATT AAACAAAAAG 
    TCCATTAAAT AATGATACAA CACAATGTTT CACCTGTTAT GGATCAAAAA 
    GAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23780043 [Map]; Strand: c
      • AT5G58890.1 - [+] show detail - AGAMOUS-like 82
        Distance: -789; Region: promoter
    Flanking Genome Sequence: 53-4450-1 - 3-prime edge 
    ACAACAACGG CCCTAAGAGC TGCCGGCGTT AAAGGTGACT ATTATATAAC 
    AAGATTACAA TAAGTGTATA AATATTAAAC CGTCTAACTA ATAAGGAAAG 
    AAATAAATTT AACTGTGTTT AACATTTTTG TCTTTCTTGG TAAGCATCTT 
    CAAGTTAGTA TATTTTCCCT TTTGGCAAAC TAAATATTCC CAATTTAATT 
    CTTCTTTCCT AAACTTTCAT GATCATTTAA ATGTTCATAT CTCGTGATCT 
    TTGACAACCT TCCATAAACA CAAACCTAAT CAAGCTCAAT ATATAAAATC 
    TCGCATATAT TAGCTTGATT CACCCTTATT CCGACAGAAG CTCCAAAAAA 
    TCGGTTTTGG TATAAAATCT CATTGAAACT TTTGCTTTGA TATTCAAGTA 
    AGGATACTAT CTTTTCCATA AACAATTTCT ACATTTGTTC ATTAATTCTG 
    CTCTGGCTCT AAGGTATTTC ATGTTTCATT TGTTCTGTTG TGGGATTGAT 
    TTCGTTTTGA GGGTGTCGAG AATTAGCTAG CTCCTACTTC TCGGATTTTG 
    ACTATTGGCT TTGCGTTTTC TCATTTATTC GTGAGTGTAA TTTTAAAATT 
    CTTTCGCTCT ATCCTATGGG TTTGTGTGGG GATTGAGGCA GCATAGAAAA 
    AACGCCTTTA ATTTGGGTTG NTTTGATCAT AATTTGAGTG TTTATAGACC 
    AACTA

AT5G58890.1

Model type
Protein coding
Short Description
AGAMOUS-like 82
Computational Description
AGAMOUS-like 82 (AGL82); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT5G55690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR