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53-4451-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26459951 [Map]; Strand: c
      • AT5G66210.4 - [+] show detail - calcium-dependent protein kinase 28
        Distance: -327; Region: promoter
      • AT5G66210.2 - [+] show detail - calcium-dependent protein kinase 28
        Distance: -320; Region: promoter
      • AT5G66210.1 - [+] show detail - calcium-dependent protein kinase 28
        Distance: -327; Region: promoter
      • AT5G66210.3 - [+] show detail - calcium-dependent protein kinase 28
        Distance: -327; Region: promoter
      • AT5G66211.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -121; Region: promoter
    Flanking Genome Sequence: 53-4451-1 - 5-prime edge 
    GATTGAAGAC AGGGACTTGA ATACTAGTAC AAAATACACA AAAGATCCAG 
    GCTAGTAGGA GGAGGCTCTA CTAAAATATG GAGTTTGTTA GAAAGTAATA 
    AATGAGAGAC ACAGAGTCCA TAATAATTTA GTGGCAATAA ATAATGATAA 
    TGGCAAACTC TGAAGTTGAA TCGAATTGAG TCTTACCGGG GGATGGTGTC 
    GGGCCCAAAC ATGGAGCTTC CCACATCCCA CAGGGGTGGT CAGTCAGTGG 
    TCTTCGCTTT CACACCAAAA TACAAATTCA TTATTCTTGA CTTCGTGAAA 
    TGACAGTTAA AATTCTCAGA AATGTATAAC AACAAAACAA AGGTAAAAAA 
    AACACAGATA ATAATAATAA AAAAAAGAAG AAGAAGAAAA GGCAAAAAAA 
    GTGGGAAAGT GAGAAGGATC TTTCGTTGGG GATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26460067 [Map]; Strand: c
      • AT5G66210.4 - [+] show detail - calcium-dependent protein kinase 28
        Distance: -443; Region: promoter
      • AT5G66210.2 - [+] show detail - calcium-dependent protein kinase 28
        Distance: -436; Region: promoter
      • AT5G66210.1 - [+] show detail - calcium-dependent protein kinase 28
        Distance: -443; Region: promoter
      • AT5G66210.3 - [+] show detail - calcium-dependent protein kinase 28
        Distance: -443; Region: promoter
      • AT5G66211.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -237; Region: promoter
    Flanking Genome Sequence: 53-4451-1 - 3-prime edge 
    CTTCAATCCC TACTCAAACT GAGATTACTT TAACCTTAGA TTATTGGTCT 
    ACTAAATTGA CTTGGTCTTT TCAAACAAGA TTTCCATTTT TCTAAAACGT 
    CTATATATAT TTAGTAATGT TTATAATACA ATCTAAGGCG TATACNGTTT 
    TCTTTTTTCT TTTCTACTGG TTCGACTTCT TAGAATTGAA TTTTGCCCAG 
    AGGAAAGTAA CAAATTATCT CTTTTGCAAA TCCGGTCACN TGACGGTGCA 
    CTGCATCACA TTCACGTGCC ATTCCAACGC ACAACCGTAT TCCGATACTT 
    TTTTCCTTCT TCTACCCGTA CGCTGTTATT ATAAGTAAGG GCTCAAATTA 
    TATTTTAATC ATGTATGGTA TAAGAAGAAG AAATTGTTTG AATTTTTTTT 
    AATGGGAAAA CCAAAGTGTT TTTATGATGA CGGGAGGCAC TTACTTGGCA 
    GTATGAACTG AAACTGATTT TTCATTATTT TTTTACTTGT CCAGATTGAA 
    AAACGTGTGC ATGACCATGT TATTAAACAA ATACTACTAC TTCACCCTAA 
    CGTATTTTAA TGTTTGTTTT GTTATACAAC TTGGATC

AT5G66210.1

Model type
Protein coding
Short Description
calcium-dependent protein kinase 28
Curator Summary
member of Calcium Dependent Protein Kinase
Computational Description
calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 124563 Blast hits to 121753 proteins in 3731 species: Archae - 157; Bacteria - 14240; Metazoa - 45960; Fungi - 14836; Plants - 27830; Viruses - 455; Other Eukaryotes - 21085 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66210.2

Model type
Protein coding
Short Description
calcium-dependent protein kinase 28
Curator Summary
member of Calcium Dependent Protein Kinase
Computational Description
calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, ATP binding, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66210.3

Model type
Protein coding
Short Description
calcium-dependent protein kinase 28
Curator Summary
member of Calcium Dependent Protein Kinase
Computational Description
calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, ATP binding, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 122907 Blast hits to 120110 proteins in 3700 species: Archae - 157; Bacteria - 14345; Metazoa - 44968; Fungi - 14295; Plants - 27583; Viruses - 455; Other Eukaryotes - 21104 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66210.4

Model type
Protein coding
Short Description
calcium-dependent protein kinase 28
Curator Summary
member of Calcium Dependent Protein Kinase
Computational Description
calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66211.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR