53-4485-1 - RIKEN Arabidopsis Genome Encyclopedia
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53-4485-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26078282 [Map]; Strand: w
      • AT5G65240.2 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -606; Region: promoter
      • AT5G65240.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -28; Region: promoter
    Flanking Genome Sequence: 53-4485-1 - 5-prime edge
    GTTAGATGGA AAAGTCTTTC GAAACAAATC GCAATTATGA CAGTCGTTGT 
    GTCCAGTCAG AGTTGAGACT AAAAAAGCCG ACATTCGTCG TAAAACTGCT
    TTTCGTGCGT GATTTAAATA ATAATAAATC ATGATGATGC TTTGACTGTC
    ATTAACAAAG AAATTAAGAA AATAGAATAA AAACAATAAG GCCTTTTCGA
    CAACTGGAAG AGGCCCAAAA GCCCAAGAAA ATCTATATGA TAATCGTTAC
    TTGTTGATTA CGAATAGGTT TGGTTTATGT CCAAACTTTT TAACATTATT
    CGTCATCAAG AACTTTCTTA TTAGAAGGAA AAAAACTTTA ATTCGAAACA
    AGTGAAAATT ACAAAACCCA AAACAATGAT GATAATACAG CTACGTAACC
    ACAGTGAGTT TCTCCATATT CAGTGTTATC GCTCTCTTGA CTTCAAAGAG
    TATTGTCCAT ACAAAACTTA CACATTGTCA TTACGTCTGT TTATTGAACG
    AGTATCTGTT TGGGTGTTGG AGGGTTCCTC TGCTTTATTT TTNCCGTTGT
    TCACTANGGG CTTGCTTGCT ACTAGTACTG CTCTCAAACA GCTTGCTGCT
    CTTTGCGATT GTAAGGATAA GCTCGAGTTG CTTTCGCTGT TGTTCCTGCA
    TAGCAAAGCA AGCAACCAGC TTTCATGAGC TTAACGACAC TAGTATGGAC
    TTCTTCAN
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26078166 [Map]; Strand: w
      • AT5G65240.2 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -490; Region: promoter
      • AT5G65240.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-4485-1 - 3-prime edge
    CATCTAACAA CAGCTCCAAC AAATGTAAAC GAAGAAAGAA AATCAAAAGT 
    TTGGTTTTTC TTTGTAAAAG ACAGAGTTTT ACAGTTTTAC TTTCTCTTCC
    TAAAGAGTTT TCAACTAGCC GAAGTGGAAC CATCCAAGCC TAAGTATTGT
    TGGTTTTATT CGTCGAGTGA ATCTTTCTTG CTGGAATTAT TCTCTTTCCC
    TTTTTGGATT TTCTTCTCCG CATCGATTTT TTTTTTNGTG GGGCNCTTTN
    TTTTTNTTTT NGCNGTCCCC AAATCNGAGT TTNTNAAATT TTNTNGAAAT
    TNGGGGNNAA TNTNTNNGTT TTTCCGGGAA ANCNGAAAAA TTNCCANCCN
    GGNCCNNNAC CCACGGGGCC CCTTTAAA

AT5G65240.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G10290.1); Has 171540 Blast hits to 120162 proteins in 4168 species: Archae - 111; Bacteria - 15580; Metazoa - 44244; Fungi - 8258; Plants - 84298; Viruses - 433; Other Eukaryotes - 18616 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65240.2

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G10290.1).
Link
InterPro Scan - TAIR