Home
Mutant Lines
53-4490-1

53-4490-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 6980329 [Map]; Strand: w
  - AT3G20015.1 - [+] show detail - Eukaryotic aspartyl protease family protein
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 53-4490-1 - 5-prime edge
```
NGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATANCC TGCACTTGAG ACTTGTGATT TGGGAAGTGA 
TGGGTCGATA TCTCTTATTG CTATTATTTT TGCTTACGTG GATTTTCTTT 
GTGTTTTTGT GGGGTCCTCC CTCTTTGCAC GTCGA
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 6980328 [Map]; Strand: w
- AT3G20015.1 - [+] show detail - Eukaryotic aspartyl protease family protein
  Distance: 0; Region: exon1 (5UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTT 
GGTCTCTCTC TCTCTCTCTC TCAATAAATA AATCTCAAAA AAATCTCATC 
TTTCAGAGAG AAGCAAGACA CCAAANACTT AGTNTGACAT CAAAACCCAA 
AATCCAAGAA GAAAGANAGA GAGAGTCTTC ACGCTCACAC GTGGCTNTGG 
CTTTGGCTCT GGCGTTGTAA ACANTGCTCC TCCCTCTCTT CTTCTTCTTT 
CTCCATCTNC ATCTCCATCT CTCTTCTTCT TCTTCAATCT CCTTCCNTGA 
TTTTCAAATC ATCGACGTTN TACAACCTNC TCTCACCGTC NNTGCAACTC 
TTCCCGATTT CAACAACACC CATTTCTCCG ATGAATCCAG TTCTAAGNAC 
ACTCTCCGTC TTCTCCACCG NGACAGATTC CCTTCAGTCA CTTACCGTAA 
CCACCACCAC CGTCTNCATG CTCGTNTGCG CAGAGACACA NACAGAGTCT 
CCGCCATTCT CCGCCGNATT TNTGGGAAAG NTATACCTTC TTCCGATTCT 
AGATACGAGG TTAACGATTN TGGGNCCGAT ATTGTTNCCG GTATGGATCA 
ANGAAGTGGN GAGTATTTCG TCAGAATCGG CGTNNGAAGN CCTCCGAGAG 
ATCAGNACAT GGTCATTGAT TCCGGTAGCG ATATGGTGTG GGTTCANTGT 
CAGCCNTGTN AGCTCTGTTA CANACAATCC GACCCGGNTT NTGACCCGGC 
TAAATCCGGG TCTNACACTG

AT3G20015.1

Model type: Protein coding
Short Description: Eukaryotic aspartyl protease family protein
Computational Description: Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 3754 Blast hits to 3736 proteins in 332 species: Archae - 0; Bacteria - 0; Metazoa - 1064; Fungi - 524; Plants - 1996; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink).
Link: InterPro Scan - TAIR