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53-4501-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24134352 [Map]; Strand: c
      • AT5G59930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -174; Region: promoter
    Flanking Genome Sequence: 53-4501-1 - 3-prime edge 
    AGAGGAGGAC CTTGTATGGC ACGGAACGGA CAATATGTTC CGGTATACTA 
    TATAGGATTA GATAAACACC CCAATTTGTT TTTGGTTTGC GAAGGCAACA 
    TATATAACAT ACATTTTTCA TATTTTTATT TATTTATATA CAAGAAGATA 
    AATATATTGC TGTCTTCCGG TTCGACTTCG TGATCTCACC AAAGAAACAC 
    GCAAGATCAC TTCCATCGAT CAATACATGG ATACATCAGC AGTACAACTA 
    CCCTTTCGCG ATTATTCTCT TCAACCTGCT CCTCGGTACA TCAACGCTAG 
    ATGTCATATC TGCTCTGTAA CAGGTGCCAT CTACAACGGC TACTTTTGCA 
    ATGATCCTAT TGTTTGGATG CATAAGGAGT GCGTTGAGCT CCCATCTGAG 
    ATCAACCATC TTTTCCACCC CCAACATCCT CTCTTGCTCA CATATGAAGA 
    GGGATGGTGG GAGTTGTTTC TGTGCTTTGT GTGGAGAAAC AAAGCCAGCG 
    AAGTACTTTT ATAGTTGTTC CACATGTAAA ATCAAGGTGG ATTTGACTTG 
    TGGGATGAAC CCACCACCGC CAGCTATTGA ACATCCCATC TGCCATGACC 
    ATCCACTTGT CTTCCTGAAG AAAAGACAGG AGAAAACCCC TTGTGAAGTT 
    TGCAAGAATA GAATTATTGG ATCATCCTAT NCNTGTCTTG GATGCAGNNN 
    NNCNTTNCNC NNNG

AT5G59930.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, ZZ-type (InterPro:IPR000433), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G59940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR