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53-4504-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24134381 [Map]; Strand: w
      • AT5G59930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -145; Region: promoter
    Flanking Genome Sequence: 53-4504-1 - 5-prime edge 
    CTTGTATGGC ACGGAACGGA CAATATGTTC CGGTATACTA TATAGGATTA 
    GATAAACACC CCAATTTGTT TTTGGTTTGC GAAGGCAACA TATATAACAT 
    ACATTTTTCA TATTTTTATT TATTTATATA CAAGAAGATA AATATATTGC 
    TGTCTTCCGG TTCGACTTCG TGATCTCACC AAAGAAACAC GCAAGATCAC 
    TTCCATNGAT CAATACATGG ATACATCAGC AGTACAACTA CCCTTTCGCG 
    ANTATTCTCT TCAACCTGCT CCTCGGTACA TCAACANTAG ATGTCATATC 
    TGCTCTGTAA CAGGTGCCAT CTACAACGGC TACTTTTGCA ATGATCCTAT 
    TGTTTGGATG CATAAGGAGT GCGTTGAGCT CCCATCTGAG ATCAACCATC 
    TTTTCCACCC CCAACATCCT CTCTTGCTCA CATATGAAGA GGGATGGTGG 
    AGTTGTTTCT GTGCTTTGTG TGGAGAAACA AAGCCAGCGA AGTACTTTTA 
    TAGTTGTTCC ACATGTAAAA TCAAGGTGGA TTTGACTTGT GGGATGAACC 
    CACCACCGCC AGCTATTGAA CATNCCATNT GCCATGACCA TNCACTTGTC 
    TTNCTGANNA AAAGACAGGA NAAAACCCCT TGNGAAGNTN GCANGAATNN 
    AATNATTGGA TCATCCTATT NNTGTCTGNA TGCNANTNGT NCTTCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24134160 [Map]; Strand: w
      • AT5G59930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -366; Region: promoter
    Flanking Genome Sequence: 53-4504-1 - 3-prime edge 
    CATACAAGGT CCTCCTCTGT GTCTCACATG TGAAGTTAGG AGGCTTTTTT 
    CGCTAACAGC TAACATGCTT GAAGCT

AT5G59930.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, ZZ-type (InterPro:IPR000433), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G59940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR