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53-4519-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5039514 [Map]; Strand: w
      • AT5G15530.1 - [+] show detail - biotin carboxyl carrier protein 2
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-4519-1 - 5-prime edge 
    ACTAATGGNG GGTATATGAA CGGAAAAGCG AAAACCAATG TTCCTGAACC 
    CGCCGAGCTC TCTGAATTTA TGGCTAAAGT CTCTGGTCTT CTTAAGTAAG 
    TCCACAATCC AATGAATCCC TTACTATCCT TTAGTTTGCT TTCTTTCGAT 
    GAACTAGTCA AGCACTAAAC ATTTTGATCT TATTAAGGCT TGNGGATTCA 
    AAAGACATAG NGGAACTTGA ACTAAAGCAG CTCGACTGTG ANATCGTTAT 
    TCGAAAGAAG GAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5039438 [Map]; Strand: w
      • AT5G15530.1 - [+] show detail - biotin carboxyl carrier protein 2
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-4519-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTGGAGTGGA GTTAGAAACA ACCTTGGTAA AGTCGAAATG ATTAAGAAGG 
    TTACACAGTC GTACAATTAA CGTTTAATTG AATGGACCAT TGTTGGTAAA 
    AAAAACATGC AATCTCTACC TCATTAGTTG TTGCACGCAA CCTCCAGAAT 
    GCAGAATGAT TCTGCAGGAG AAGAACAGAA CAGAGAATTA TGAATCAATG 
    CATACTAACT TTAAACAGTC ACCAACTCGA GCACCATTGC AGTGGAAAAC 
    ACACACAGAA AAAAGGCAAA TCTTTTCGTA AAGGCTCACA CCTTTTTTAT 
    AGAATCATCA TATGCAAGAG AGGCAGAGAG AGAAAGAAGA GGAGCAGAAG 
    AAACCTGAGA AACATCGGAG GGAAAGGAGA TCCCATTGGG TTGCGGCTGC 
    CATCTTTGAG TAGAGATTCC AGGGAGAGAT CCGACCCGCC TGTTCAGAGC 
    ACAGATCTTG ACGCAAGGTA CCGACAATGA CGCCATTGTT GAGACAGCGG 
    ACGATGAAAC CGAGGAAGTA GGAAGGAGAG ATATGAGAGT GTTGAAATGC 
    AGTGTACTTG CTATATTTTT CTTTTCTTTA TTTTTTCTTT GGTAAAGAAA 
    TCTGATTTCG ATGCTTACGA AGAAACCCAA CTCTTTTACT AACTTCACCA 
    AACCGCTCCT TTTGTCTTCT ATCAGTTCAA TCGTGTCATG TCATAACATA 
    GTGCCTCGGN GTTTNTCTGT CT

AT5G15530.1

Model type
Protein coding
Short Description
biotin carboxyl carrier protein 2
Curator Summary
biotin carboxyl carrier protein isoform 2 (BCCP2) mRNA,
Computational Description
biotin carboxyl carrier protein 2 (BCCP2); FUNCTIONS IN: biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Biotin-binding site (InterPro:IPR001882), Single hybrid motif (InterPro:IPR011053), Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: chloroplastic acetylcoenzyme A carboxylase 1 (TAIR:AT5G16390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR