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53-4529-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23124075 [Map]; Strand: w
      • AT3G62510.1 - [+] show detail - protein disulfide isomerase-related
        Distance: 301; Region: intergenic
      • AT3G62520.1 - [+] show detail - transposable element gene
        Distance: -1049; Region: intergenic
    Flanking Genome Sequence: 53-4529-1 - 5-prime edge 
    NCCTCGGGNA AACTAACAAA ATCGGTTATA CGATAACGGT CGGTACGGGA 
    TTTTCCCATC CTACTTTCAT CCTTGAGAAT AGTGAGTCCA TGGACTTTTA 
    CCGGATATGA GTTGTACAAT GCAGAGACTG ATCCAGAACT GAAAGCTGTT 
    ATGAGAGGAC ATGGGAAAAG CCATTGGCTT CGTTTGACCG GAAAGAATTT 
    ATGAGTAGTA AGTAGCATAT CTAAAGTAAA CGCCATGCAA ACAAAGAAAA 
    CAATGATGAA GATATAAGAG CATCCACATT GGTGGGCTTT TAGCAAATGT 
    TCTTAACAAT AATTTTATAA TTTATTTTGA AGTTAAGAGT TTTGATAAGA 
    GTTTTTTTTT TTNAAAAGGG TNTTTNGNNT TTTNTTTAAA ANCAAAATNT 
    TANCTTTTTT CCCANTTAAN CNTTAANTTT AAATNTTAAT NTNTNTAAAA 
    ATTNTTTTAA GTTTTCAGCC CNCNTNNGGG TTNGNCCCNC AGGGAAGGGG 
    ATNATNANAA AAANAANCNN TNGGNAACTT TNATTNNCCT TTNTNACNGC 
    CTTGTTNNTT NNGTCNNAAC NATTTNGANC CNGNCCTTNC TTTGGTTNTT 
    NNTNGCNNAN CCTNTNGTTC NCCATTTATA AAACNCNATT NTGGGGCAAT 
    GAAATANCCN TAAGTTTTGG GATAACCANC CCGGGCCGTN NACCCNGGGN 
    NCCNTTTAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23124084 [Map]; Strand: w
      • AT3G62510.1 - [+] show detail - protein disulfide isomerase-related
        Distance: 310; Region: intergenic
      • AT3G62520.1 - [+] show detail - transposable element gene
        Distance: -1040; Region: intergenic
    Flanking Genome Sequence: 53-4529-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    CTGATTCTCA AGCTGAGACG AATTCAAGAA TTACAATTTT TTCTCGAAAC 
    CCTTCTCCAA CTCTGTACAC TCAACGTCAT TACTCTCTTC CTATACACAG 
    GCGAAACAGA GTCCTATGTA ACCACACAAA ACAGAGTTTA AATCAAATTA 
    AGCAATATAA CCCACGAATC AAGTGAGACA GCAAAATAAG ATAAAATATC 
    TGCAATCTAG AAATTCAGGA GATTGATAGA TCAAACTACT TAAACATTGC 
    TAATCCACAA CCACAAACTA ATGTAATAAT GATTGTTTTG ATTCAGTTTT 
    TGGAAGCTTT AACTAATCCA TCTTTTCGTG TTCTTCCTCA TCATCTTCTG 
    CTAGTATCAC CAACCCTGAA CTATGAAGTC TTCCTTTGTC CTGTCTCCTT 
    CGTATACTAC AACGTTTCCG CTCGCTGACC TGAACTATGT CGTCAAGGCT 
    CTCGGCGACA ACAAGCTTCA CTGGTTCGTT GTTCTCAGCT GGAATAGGTT 
    GAGAATTTTT GTGGACAGCA GCTNTTCCAT CCTAGAGAAA ACATTTTCTT 
    TGGNTAGGTT ATATTGATTT CATATATNCT TCTTTTACAT ANAGCNTGNG 
    NGAATGTGTG AAAAANANAA TGAAACCTGG GAGGNNTTGA CCCATGATTN 
    AATCTGGNCA ACCTNNNCCN NGNCCNTNNN NNTNACCNTT GATGAAAANA 
    ATATNNNANT NTNGNCNTCN TTNTCNCCAT TGNNAN

AT3G62510.1

Model type
Protein coding
Short Description
protein disulfide isomerase-related
Computational Description
protein disulfide isomerase-related; BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 215 Blast hits to 215 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 2; Plants - 111; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G62520.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
hAT-like transposase family (hobo/Ac/Tam3), has a 1.1e-86 P-value blast match to GB:CAA29005 ORFa of Maize Ac (hAT-element) (Zea mays)
Link
InterPro Scan - TAIR