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53-4544-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24215072 [Map]; Strand: w
      • AT5G60140.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-4544-1 - 5-prime edge 
    CTCACCACCA CATTTCTTAA ACCCTAATTT CCAAATGTTT CCAGAAATGC 
    TTCTAACGGT TACAGTTTTA GGCAAAGACT TTGGTAAACA GCTGTTGAAA 
    GAAATGGGTA GTACCTGAAA AGTTTCTACA AATTTCAAGC AACCAGAAAA 
    CAAAAAACAG AGTGAAGAGA AGTGTGTTTT ATTACCAGAT CATCACCGGA 
    TTCACTAGGA AGGTACGGTT TAAAGAACTT TGAAGTAAAA CCATTAGAGT 
    AATTTCCTGT TCCAAAATAA GAAAAGGAAG AACATNAATG TACAGAGCAC 
    ATTACAAGGG AAGAATCAGG AACAGAGAAG TGAAAACCTC TTGTGTTCAT 
    TGGCGTCAAC TTCTTGTGCT CTTGGAATAC TCTGAACCCT AATTTGATCG 
    GAATAAAAAG GNGACAAAGT TTNTCANATC CAGTTTTNCA NATGGATTGG 
    TTTAAAGGGT TGGCCTTTGN NNAAAACTGN AAACANAGGT NTTTTGNTTN 
    AAGCTTTTCC TTNANGGGAA ACNACCCTTN AAGGCNNTTT TTNTNAAAAA 
    NNTNNTTNAN GGNCCCAGGG TTNNNTNNGG CCCNANNAAA AANAAAAANG 
    GGCCTAANNN GGGNNAAATT NTTTNNGGGN AANGNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24214956 [Map]; Strand: w
      • AT5G60140.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-4544-1 - 3-prime edge 
    GTGGTGAGGT TGAGAGATTT GTTATGGTTA GTGGTTGGAA GAAGATTGTA 
    AGGGACGAAA ACCTGAACGG TGGAGATCTC TTGTCATTTG AGTTTGATGG 
    CTCTCATTTT TTTAATTTCT GTATCTTTGA CCATGAGACT ACNGTGTAAG 
    AGGCTTAAGA GAAGTTCAGA GCAAAGCAAG GACATCATCA AAGTGGGATC 
    TGATTGTGAA GAAGAATCTC AGGCTAGTGA TGATGTTATC GTTCTTAATA 
    GTGATGATTC TGACGATTCT GATAATGATT ATTCTGTTGA GGATGATAAT 
    GTTGCTGAGG ATGATGATGG TCTTGAGGAT GAAGTAGATG TTGAGGCTGA 
    GGATGGTTAT GATGCTAAGG ATAGTGATGG TCTTGAGGAT GAAGATGATG 
    ATGAGGCTGA GGATGGTTAT GATGCTAAGG ATGATGATGG TCTTGAGGAT 
    GAAGATGATC TTGAGGATGA GGATGACGAA AGGCGGTATC TGGATGATCA 
    CGAGAACCCG TACTTTACTA TGACACTCAA TCCGAAGAAG AAGAGCCAAT 
    TGGTAAGAGA AAAAAAAACC TGAATATTTA AGATCTTTAC ACACTCTCCA 
    TTTAACATCT TTGGTTATGG ATTCTTATGT GAATAAATTA ATAAGGAATA 
    TCTCAATCTG TTTTATGAAG GTTNGTTTCT TGATGCACCN

AT5G60140.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR