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53-4577-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24215259 [Map]; Strand: c
      • AT5G60140.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-4577-1 - 5-prime edge 
    CTTNTCTGTT CCTGATACTA CCCTTGTAAT GTGCTCTGTA CATNGATGTT 
    NTTCCTTTTC TTATTTTGGA ACAGGAAATT ACTCTAATGG TTTTACTTCA 
    AAGTTCTTTA AACCGTACCT TCCTAGTGAA TCCGGTGATG ATCTGGTAAT 
    AAAACACACT TCTCTTCACT CTGTTTTTTG TTTTCTGGTT GCTTGAAATT 
    TGTAGAAACT TTTCAGGTAC TACCCATTTC TTTCAACAGC TGTTTACCAN 
    NGCCTTTGCC TAAAACTGTA ACCGTTAGAA GCATTTANGG AAACATTTGG 
    AAATTAGGGT TTAAGAAATG TGGTGGTGAG GTTGAGAGAT TTGTTATGGT 
    TAGTGGTTGG AAGAAGATTG TAAGGGACGA AAACCTGAAC GGTGGAGATC 
    TCTTGTCATT TGAGTTTGAT GGCTCTCATT TTTTTAATTT CTGTATCTTT 
    GACCATGAGA CTACGTGTAA GAGGCTTAAG AGAAGTTCAG AGCAAAGCAA 
    GGACATCATC AAAGTGGGAT CTGATTGTGA AGAAGAATCT CAGGCTAGTG 
    ATGATGTTAT CGNTCTTAAT AGTGATGATT CTGACGATTC TGATAATGAT 
    TATTCTGNTG AGGATGATAA TGTNGCTGAG GATGATGATG GNCTTGAGGA 
    TGAANTNNAT GTTGAGGCTG ANGATGGNNA TGANGCTAAG GATANNGANG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24215375 [Map]; Strand: c
      • AT5G60140.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-4577-1 - 3-prime edge 
    CAGAGAAGTG AAAAACCTCT TGTGTTCATT GTCGTCAACT TCTTGTGCTC 
    TTGGAAATAC TCTGAACCCT AATTTTGATC GGAAATAAAA AGGTGAACAA 
    AGTTTCTCCA GATCCAAGTT TTTCCAGATG TGATTTGATC TAAAGGTGTT 
    GGCCTTTTGT AGCAAAAACT TGCAAAAACA GAGGGTTCTC TCTGTTTCGA 
    TGCTTTTTCC TTCAAATGGA AAACAAACCA TTAATAGTAC TCTTCTTATT 
    CAAAAATAAT TCGTTAAGCG GACCAAGGTA TCGCTAAGGC CCAAACAAAA 
    AACAAGAAAT GGGCCTTAAG TTTGGTTCAA TCTATATCGT GTAAATGACA 
    TTATCGTCCT TAAACAAAAG AACCACAGTA AAGAGTCGAG AAGGGTATAT 
    TAGAGAAAGA AGGACTTGTG ACATCTCAAT TCTTGAACAA GAAACTTGAA 
    ACTTGAAAGA AGAATGAGAT AGTGTTAAGT GGCAGAGTTC CAAGTATCTT 
    AGTATTATTC TCCTCCTATG CCAATGCTTT TCTTATGATC ACATAGAGAG 
    TCATAACATT CTTTTTATAT GAACTCGCAG GTTTTAAACA GCCCTGATGT 
    GTGAACCATT CATAATGATT TCTCCCAAAA TCTATAGCTC TAGTATACAT 
    TATTATTGTA AGACTGTGTT GATCGTCTTT TGCACCTTCA TGTTTCAGAC 
    NAACCAACAA AATCAAG

AT5G60140.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR