1. Home
  2. Mutant Lines
  3. 53-4584-1

53-4584-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10378454 [Map]; Strand: w
      • AT5G28463.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -992; Region: promoter
    Flanking Genome Sequence: 53-4584-1 - 5-prime edge 
    GCTCCACGGG TCAATACTTT TTCACATGTT AATTTTGTTG GATTACTATA 
    AACATAATGA ATGACCTTGA AGAACTCTTT GGAGCTAAAC CCAACGACCA 
    ACCCATTACN GGCATTACCA TTCTCTCTAC ATGATTTTCT TCCTCTTAAA 
    CTAATTTAAA ATGGAGAAAG ACAAAATTTG AAATTTTATT TTCACGTGAT 
    TAGACCATGA TTACGTTTCG GTCGACACGC AAGTAATTTT AAAACTTAAA 
    ACATATGATT TGAAAAAGGT AAAACACCAA GTCATGGNAA ACTGATAACT 
    TCCGTTTGAA CCGTTTCCGG AATTAGCACC TCCGACAATA CCGGCTTAAA 
    CCAGAGGAAC TACGAATTAG ACTGAGATTT CAATCAAACC GGGGTATCCC 
    GGTTTAGCTT GTTAATGGGC CAAAATAAGG AGGTCATTTG CCGACTTTAG 
    CCCGAAGTAG GGAGACCGTC TAGCCGACTT CCTAATTCGA AGAAAAAGAA 
    GTTTTCTCCT TTGAAAATAG GAAGTCTTTG GAGATAAAGG AAATTAGAAG 
    ATTCAATCCT CGAAGAAATA GAAGTTTAAC AAATCTTTTA ACCGNCTTAA 
    TAGTGTATAA ATAGAGGGGG TNGTCCTCTA TTCGGGGGAT NANNANN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10337126 [Map]; Strand: w
      • AT5G28370.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: -2555; Region: intergenic
      • AT5G28380.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 1597; Region: intergenic
    Flanking Genome Sequence: 53-4584-1 - 3-prime edge 
    CGTGGAGCAG CCCACTGAAT TGGCGATCAA AGATCTTTTT GGGCGGCTTT 
    CTAGATTTAC GACATAGTAA AACTCTCTCT ACATTAATCT TTGCCTTAGA 
    TTGAATTGGT CGGAGATCGA AAAGACTAAA ACTAGATGGA CACGCNTGTA 
    TGTATCTAAG TGGAGTGATT ACTCGTTTTC TTAGAGTGTA TTTGTAGGGA 
    ATGTATCTCT ACATTAATCT TTGGGCGGTT TTGTAACTTT TGATCAGTGT 
    TTCGTCTTGC TGTATCTGCT GGAGAGAAGC GCATGTAACT TTCGGCACAT 
    AGCTTCGATT GGAACAATAT TGGACTATAT GGAGAGCTGT CTGTCTGGGC 
    AATCTGTGGA TATGTTTCCC GTCTCTTGGT TCGTCGTACA ATGTCGGAAA 
    ATTGCTCACG AAGTTGGTCG TTTGCAAGTG GTGTCAGTCT GAATTGTCTT 
    GGAAAAACGA TCATAACTCT CAAACCATAA CCTCAAATCG TGATCCGCTT 
    TTTTCTGTGG CTTCGTGTGA CTGTTGCTGA TTATTCCAGA AAATATCGTA 
    ATTTTCCGAG TTGTTTTGTT GCTCCATTGG CGATCAGAAT T

AT5G28370.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G28460.1); Has 52907 Blast hits to 14569 proteins in 306 species: Archae - 7; Bacteria - 68; Metazoa - 890; Fungi - 845; Plants - 49290; Viruses - 0; Other Eukaryotes - 1807 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G28380.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G28340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G28463.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR