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53-4590-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24215101 [Map]; Strand: c
      • AT5G60140.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-4590-1 - 5-prime edge 
    CTTCTCTTCA CTCTGTTTTT TGTTTTCTGG TTGCTTGAAA TTTGTAGAAA 
    CTTTTCAGGT ACTACCCATT TCTTTCAACA GCTGTTTACC AAAGTCTTTG 
    CCTAAAACTG TAACCGTTAG AAGCATTTCT GGAAACATTT GGAAATTAGG 
    GTTTAAGAAA TGTGGTGGTG AGGTTGAGAG ATTTGTTATG GTTAGTGGTT 
    GGAAGAAGAT TGTAAGGGAC GAAAACCTGA ACGGTGGAGA TCTCTTGTCA 
    TTTGAGTTTG ATGGCTCTCA TTTTTTTAAT TTCTGTATCT TTGACCATGA 
    GACTACGTGT AAGAGGCTTA AGAGAAGTTC AGAGCAAAGC AAGGACATCA 
    TCAAAGTGGG ATCTGATTGT GAAGAAGAAT CTCAGGCTAG TGATGATGTT 
    ATCGTTCTTA ATAGTGATGA TTCTGACGAT TCTGATAATG ATTATTCTGT 
    TGAGGATGAT AATGTTGCTG AGGATGATGA TGGTCTTGAG GATGAAGTAG 
    ATGTTGAGGC TGAGGATGGT TATGATGCTA AGGATAGTGA TGGTCTTGAG 
    GATGAAGATG ATGATGAGGC TGAGGATGGT TATGATGCTA AGGATGATGA 
    TGGTCTTGAG GATGAAGATG ATCTTGAGGA TGAGGATGAC NAAAGGCGGN 
    NTCTGGATGA TCACNANAAC CCNTACTTTA CTATGACACT CANTCCCNAA 
    AAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24215217 [Map]; Strand: c
      • AT5G60140.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-4590-1 - 3-prime edge 
    AAGAGAAGTG TGTTTTATTA CCAGATCATC ACCGGATTCA CTAGGAAGGT 
    ACGGTTTAAA GAACTTTGAA GTAAAACCAT TAGAGTAATT TCCTGTTCCA 
    AAATAAGAAA AGGAAGAACA TCAATGTACA GAGCACATTA CAAGGGAAGA 
    ATCAGGAACA GAGAAGTGAA AAACCTCTTG TGTTCATTGT CGTCAACTTC 
    TTGTGCTCTT GGAAATACTC TGAACCCTAA TTTTGATCGG AAATAAAAAG 
    GTGAACAAAG TTTCTCCAGA TCCAAGTTTT TCCAGATGTG ATTTGATCTA 
    AAGGTGTTGG CCTTTTGTAG CAAAAACTTG CAAAAACAGA GGGTTCTCTC 
    TGTTTCGATG CTTTTTCCTT CAAATGGAAA ACAAACCATT AATAGTACTC 
    TTCTTATTCA AAAATAATTC GTTAAGCGGA CCAAGGTATC GCTAAGGCCC 
    AAACAAAAAA CAAGAAATGG GCCTTAAGTT TGGTTCAATC TATATCGTGT 
    AAATGACATT ATCGTCCTTA AACAAAAGAA CCACAGTAAA GAGTCGAGAA 
    GGGTATATTA GAGAAAGAAG GACTTGTGAC ATCTCAATTC TTGAACAAGA 
    AACTTGAAAC TTGAAAGAAG AATGAGATAG TGTTAAGTGG CAGAGTTCCA 
    AGTATCTTAG TATTATTCTC CTCCTATGCC AATGCTTTTC TTATGATCAC 
    ATAGAGAGTC ATAACAT

AT5G60140.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR