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Mutant Lines
54-0033-1

54-0033-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 10490550 [Map]; Strand: w
- AT5G28510.1 - [+] show detail - beta glucosidase 24
  Distance: -6528; Region: intergenic
- AT5G28515.1 - [+] show detail - transposable element gene
  Distance: -1444; Region: intergenic

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCATG GCTGCTAACG TGGATGCCAC TTCCTTGTAT TGTTGTTAAA 
ACGTGTGAAA TTATACATCT TTTAAACCGA GATTTATATT TTCACTAGGG 
TCGACCCAAA AAAAAAAANG NNTNGGGNAA NGNNGTAANT TAANTAAACC 
GGANCTNNNN ANNTTAAAGG NNGGGTTTTA AANCGGNGGT TTTTTNAGCC 
NTNNGGGCCC NANTTTTTNN GGTTTNNNGG GNCTTTGGNN TTTNCGGGNG 
GGNTNCGNNT TTCCCGGNTT GGGNCTTTTN NANTTNAAAA NTNNAAANCC 
NNACCCCAAA NTTTNGTTTN AAANCNTTTT NAANTNCCTN AAAANNCCCC 
AAAAAANTTN TAAAACCCCT GGNGTTTTTA NCTNNCNNNT NTTTNAAAAN 
GNAANNAANG NCCCCANCAN TTTCCAAAAT TTTTNAAAAN AAAAATTTTT 
NNGNCCCTAA ANTTTTNGAA AATNNNATTT TNCCNAAAAA ATTTTTNNTN 
NAAANNNNTN TTTGGNATTT NTGGGGGTCC TNNANNGGAN CCGGTTNCGG 
NTTTGAAAGN GNNGNATANC NACCCNGGNC CGTNANCCNC NNNCCCCCTT 
ANA

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 10490478 [Map]; Strand: w
  - AT5G28510.1 - [+] show detail - beta glucosidase 24
    Distance: -6456; Region: intergenic
  - AT5G28515.1 - [+] show detail - transposable element gene
    Distance: -1516; Region: intergenic
Flanking Genome Sequence: 54-0033-1 - 3-prime edge
```
ATTTCACACG TTCTTGTAAA TTCGGGTATG AAGTTTGAAT GTTTTCAGAA 
CTTGGGTATG TATTAGCACA TAGAAAATGT TTAGGTATGA ATT
```

AT5G28510.1

Model type: Protein coding
Short Description: beta glucosidase 24
Computational Description: beta glucosidase 24 (BGLU24); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G09260.1); Has 11366 Blast hits to 11018 proteins in 1472 species: Archae - 140; Bacteria - 7863; Metazoa - 718; Fungi - 202; Plants - 1442; Viruses - 0; Other Eukaryotes - 1001 (source: NCBI BLink).
Link: InterPro Scan - TAIR

Phenotypes

Morphological phenotypes

Determination of insertion point(s)

AT5G28510.1

AT5G28515.1