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54-0052-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4007864 [Map]; Strand: c
      • AT3G12610.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: -57; Region: promoter
    Flanking Genome Sequence: 54-0052-1 - 3-prime edge 
    TGTGTAATGA GTCTTTGGAT TATATAGAAA CGTAGAAAAG GAGAGAGAGA 
    CATTTGCATG TGCATGGTAT CATGGGCATG TGCATGTTAC TACTATTGTT 
    CGATATATTA NCTTANGAAT GTATTCTTAT ACCCTTTAAT CTATTGTNCT 
    AAAGATGAGT ATCATGTGTG TATGTCAGTT TTACTTTTTT AAAAAATATT 
    TGATTAATCG AGTATCCAAC CATGATCCGG CAATATATAA GTTAATCATG 
    TTGATTTGTT TCAACGGTAA GGATATATGT TTTGATTTTC ATGGACATTT 
    AACTAATGCA AAGGGATAAT TTACATGGAC ATTGAAGTAA TGCATATTCT 
    TAGACGTATT TATACATAGC TCTATGATCA ATAATGCACG GATTATGGAG 
    CATGGACTTG CTAT

AT3G12610.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Curator Summary
Plays role in DNA-damage repair/toleration. Partially complements RecA- phenotypes.
Computational Description
DNA-DAMAGE REPAIR/TOLERATION 100 (DRT100); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G20820.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink).
Link
InterPro Scan - TAIR