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54-0062-5

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22222166 [Map]; Strand: w
      • AT3G60150.1 - [+] show detail - Protein of unknown function (DUF498/DUF598)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-0062-5 - 5-prime edge
    TATTCCCTTG GGGAACAGTT TAGACTTGAG ANCGCGGAGA AGTTGGGAGA 
    CGGTGAAGAT GGCAGTGAGA CAAGNAAGCA ATGGCGACGT TGCCGAGGCT
    GATGCGNAGC ATGAGAAACG AAGTTACGAA GCAGCCCAGT CTTGTCTNGC
    ATCTCTCAGA AGAGCTTTCT CTCTCTACGA TCAGATCAAT CTCATCGATA
    ACGTTCCTGA GGATCAGCTC CGATTTCAGG AGTATTCATC TCTCTCAGTC
    ATGTTCCTAA TTTGACTATG TAGCAAGGGA ATTTGGATTT TCGGGTATGA
    AATGAATCAA TTAATGGTGC TTTTTGCAGG TTTGATGAGA CGAGTTTCAC
    TGTGAATGGG GTTAAATACG AAGGAAGCTT GCTCTGTGTT GGGAATTTGC
    TAATGTCATG GAC
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22222047 [Map]; Strand: w
      • AT3G60150.1 - [+] show detail - Protein of unknown function (DUF498/DUF598)
        Distance: -58; Region: promoter
    Flanking Genome Sequence: 54-0062-5 - 3-prime edge
    NNACNCTNGA ACNAGCTCGG ATTATTGGTT GACGGTTTCT AACCANAAAC 
    CAATGATCCA AATCGGTTTG CACTATTTAA TTGCAACCAT TCNGATACAC
    TACTTACTTC TTTCTTTTTT TGGTAAGTCA GATACACTAC TTACTAAACA
    GATTGATTAT TCCGTTTACG TTTCGGTTAA GAGTTTTTTA TTTATTTTCT
    GTTTACCAAT TTANAACCGA ATGTATACTN TATAT

AT3G60150.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF498/DUF598)
Computational Description
Protein of unknown function (DUF498/DUF598); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF498 (InterPro:IPR007523); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF498/DUF598) (TAIR:AT2G44525.1); Has 753 Blast hits to 753 proteins in 341 species: Archae - 0; Bacteria - 405; Metazoa - 118; Fungi - 87; Plants - 61; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Link
InterPro Scan - TAIR