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54-0066-3

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17212990 [Map]; Strand: w
      • AT1G46192.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 54-0066-3 - 5-prime edge 
    GGACGAAATG ATGTCAAACA GTTTTTTCGA ATAATTTCAT ATAATATTCA 
    AAAAAAAAGA AGTTGTTTTT TCCAATCAGG TAGTCTTAAA CAAATCTGCA 
    ACATAAGTTA TATGTTTTAA AAAATATACT CTATGGTTAT TTGGGTTATA 
    TTCATCAATC GATAGGTCTG TCCATGACAA CTTACTCTAA ATTATTAGGA 
    GCAAAATCAT GATCTAGTTT AATAAACGGT CTAAACAGAC TAATTTTTTT 
    TTNCCTNGGA CCANNATNGG GTTANNCCNC NNGGNTANTN NNCTNGNCCA 
    ANTTNTTNAA AATCNAACCC TNAAAATTGG NGNAAAANNA AAATNNTTTN 
    NTNNGNCNNT GGNAAANCAA ANGGTCAAAT TNTAAGTTTT TAANNAANCT 
    NANGNCCANC NGATTTNCGA AAAGTTNTAA NNGCCAANGG TNGTTTTTTT 
    TTTNTACCCC NCTNTNTTTT TNTNGTTTAA GTTTTNAAAN CAANNTNTTN 
    TTTTTGGGGT NNNNCCNNAA NNANNNNCGG GNNNGGGGGA NNTNTNNCNN 
    CCCCNNNAAA AANGNAAANN NTTTNNNNNN ANNNCCAAAA AAATTNGGNN 
    NNAAAAAAAA AA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17212915 [Map]; Strand: w
      • AT1G46192.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 54-0066-3 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCGTCCA 
    TCGCANGGAT ATGTTGACCA TTGGGAGAAA TTTTGTTTTC GATAACAGGT 
    TATTTTGTCT AATATAACTA GNANACAAAT ATAATTATNG TTCCANGCTA 
    ATTTACACAA TAACATTATT ATAGGAAAAA NTACCAAATG TTCACNAACC 
    AAAAGAGTAT TTTCAGAGAT TTATCATATT ATNGCCTAAG TAAATATTAN 
    AGTATAGTNA TTTNGCACAT ACAACCTTAT ATTAACCCAT GACAGTGAGT 
    CTATGGACGA ATTTTCAAAA AGCAAAACAN AGATTGTTTA AAANGAAATG 
    ACTTGGTTGG AGTTGGACCA TTCTAACNAA TAANGATGAA NAGGAATT

AT1G46192.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
hAT-like transposase family (hobo/Ac/Tam3), has a 7.4e-69 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana)
Link
InterPro Scan - TAIR