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54-0136-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26664394 [Map]; Strand: c
      • AT5G66780.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: 0; Region: exon3 (3UTR)
      • AT5G66790.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -748; Region: promoter
    Flanking Genome Sequence: 54-0136-1 - 5-prime edge 
    CCNCGACGGT TCAACTNAAA AACCGTAGAT TTGTTCATAA ATAAACAAAC 
    ACAGTCAAAT TAAGGGAATG TTCAACAATC AACAAAAACT ACTAATTCAA 
    CGAGTGTTAC AAAAGTGATA AGGATAACCA ACAAAAACCC GGTAAAGGTT 
    ACGGGTCAAA AAACGCAATT AAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26664510 [Map]; Strand: c
      • AT5G66790.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -632; Region: promoter
    Flanking Genome Sequence: 54-0136-1 - 3-prime edge 
    CGTCGAGGAA AACATTCTTA GATAACGTCA GCAATGAATA TTAGCCTGTT 
    TTCGGACTTT CGATTCCGAT GCAACACGTT AAAAGTAACG TCAGCGAAGA 
    TAAATTTGGT AAATTCATCT GAAACTCCAA TGCTGATGGA ACTTAGCTGG 
    TGTGTTGCGT GTTCATAATT TATGTTATTA GTAACGTCTT AGAAGTTGGA 
    ATATTCACTC CAAGTTCGCA CTTCAAAACT TTCAACAAGT TTTTAGTTCT 
    TATCGTACGT CTCAAAACAG AGTTGAGGAG ATTTAGCTTC TACTGTTTAG 
    TGTTCTACAC TTGCTTCGTA CAAAGAATTG AATTTTTATT TCCATAGTTA 
    CATGCACATA TTTGTATTAA CAATCTCTTA TTATTGGTTA GTATCATATC 
    TGTGCT

AT5G66780.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66790.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G23450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR