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54-0167-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23367155 [Map]; Strand: c
      • AT3G63240.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-0167-1 - 5-prime edge 
    ACCCGAATAC CCATCTCTCT GAACTCGGGT TCCAAAGTTG TTGTCTTTCT 
    TTTGCCCCTT CTTGGATTTG GCGTTCAAAG AAACAAACAA ACAGCAAAGC 
    AACAACAAGC AGTTTGGTCT GAAACGAGGT TCCTTGTTCC TGCATAGGAA 
    TATAGGATAG GAAGAGTGAG AATCCCTTAA CCTCCTCCTC TGTTTATAAG 
    AAGAAGTGGT CTCACATTGA CCTCTTCTAA ATTCGTCAAC CATCCTCTTG 
    GGTCTTCTTC GGTTCAGGGG AGGCTTATAT TGACTTTTTT TGCAAAAAGA 
    TTGAATTGTG AATCAGAGAT CTATCCATCT CTGTATGAAG CTGAAGAACA 
    ATGGGTGATG GTAACCTCAA GAAAAGCAAG GTTTTGTTTT CTCTATCTCT 
    CTCAATTGAT TATGATGTTA TCTCCTAAGA TGATCTCTAT CTAAATCTCC 
    TTAAATTGTT TCTGCTGCAG CTGTCATGGC CCAAAACGTT GGTCAAGAAA 
    TGGCTCAACA TCAAGAGCAA ATCAGAAGAT TTTCACGCAG ACGACTTGGA 
    CAGAGGTAAG AAAGAAAAAA AAAACTCANG ACATTTATAT TTTTAGGCTT 
    ANCTTTAATT ATAAGTTNGN TAAATCTCTA GTAAGTNCTA ATAGGGATGA 
    CCATCTAGGG AATGTGAAAA NANAAAANCT TTTAACNAGT TTCTNTTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23367271 [Map]; Strand: c
      • AT3G63240.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-0167-1 - 3-prime edge 
    ATTCGGGTAC AGCCCGGATT TTCCTCTTCC TTTCTTCTTC TTCTTCTTGC 
    TTCTTGTTTT CTGAAATGTA TCCGTACTCT CGCTCTCTCT CTCTTTCTGT 
    GTCTTTAAAG AAGAAACGGA TCATATGACT CTCTCTCTCT CTCTCTNCAC 
    AGCTTCTTCT TCTTCTTCTT CTTCTTCTTN TGCATCTCTC TCTCTCTCTC 
    TCTNTCTNNC NTANAAAAGT GGGGNCCCCN CCCGTTTAAA AAGAANTGTA 
    ATANNAAANC CGATGTGCNC CCGTTTTTNT NTGTNNGGGG NNGGCACACA 
    CNACCCGGNC ACTNTCNCAA TGNGCATTTT NTAANTANCA CCAACAAANA 
    NNGCTAGGCG CAGCAGNGCA TANAGAGAGA GAGAGAGTTA NCGCTCTCCC 
    CCNCACACTG TGTTNANATA TCNNANNGAT TGAGACNTAT CNNATTCCCC 
    TNNNTANAAA CACACACGTG NCGAAAANCA CNGANCAANT GNTNATCCCN 
    NTATGTGCAN AAAATANCAC ACAATATATA GCATNTNATG TGGCNCCNCA 
    GTGTNNNTCG TGNAGAGTGA AAAANAAAAA AAATANACTC TTNATAGACA 
    CTNACACACC AGNGATGNGC GTGTGTATAT TNAGANGCNG GANATNAGAT 
    AANACACATT NCTCANNCAG GAGNGGCACA CCCCCCCNTT TTTATATATA 
    NAAAANAGAC ACNCTTNGGG GN

AT3G63240.1

Model type
Protein coding
Short Description
DNAse I-like superfamily protein
Computational Description
DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 2363 Blast hits to 2040 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 816; Fungi - 600; Plants - 662; Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink).
Link
InterPro Scan - TAIR