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54-0209-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21123698 [Map]; Strand: c
      • AT1G56420.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 54-0209-2 - 5-prime edge
    ATTGTATTTG CATAATTCTG GTTTATACTC TTAGCTATAA CCCCAGCTAA 
    TTGTACAGCT GATTTAATTA TATAAACCAT TCATGATTTG TAATGTTTTA
    AATTCCTCGG CATTGCAGTA TNGATCTTGT TCTGCTTTCT AAGAGCATTT
    ATCTAGTATA TATCTTGTTC TCCTTTCTTT GACCATAGTT CTATGTTTCA
    TTCTTAGAGA TGATTGAATT ATATAGAAAA CTCATTAGTC ATGATAGGTA
    ATACAAGTAC ATATGGTGAT ATGGATATCG GTTTTGCATA ATTCTACATC
    ATATTCTTAG CTTATAGCCC CCACCTAATT TTGAGCTGAT TGAACAATAT
    AAAGGAAAAA CCATTCATAA GAAGCAATGT TCTAAACTCT TTGGAGGCGC
    AGTATCGATC TTGTTCTGTG TCATATTCTT AGAGCATTTA TGGATATCAG
    TTTTTTTCCA TATCTCTATG TCACATTCTT AGAGCTGATT GAATAATATA
    GGTCAGGTAG GTAATGTTCT CTATTCCTCG GAGTTACCTG TATGCATACT
    AACATACACA GATAGTCTTC TGTTCTGTAC TACCAATTTC TTGGTTTTAT
    TTTGNTGTCG GAAAAAATAT GTGTTGATGA AATAATTTTT GNTTGNTGGT
    GGTGGNGGTG NCTTGNGGGC AGANGNCCAG TGCTAGAGAA G
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21123811 [Map]; Strand: c
      • AT1G56420.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 54-0209-2 - 3-prime edge
    ATTTATACAA TTGCCGTACA TGTTAGTAAA CTACTGAAAA TCTATCAGTT 
    TGCAAGATAA AAACAAAGGC TTCTACTACA TATGCAAATA CTTAACCATA
    ATATACAGAA ACCAGTAATC CAGAATCAAT GTAATAAGAG CNTGAGATAT
    CTAAAGGAGA AAATTTTACT CGAGTTCTTG GCGAAGAGCA TCAAAGAGTT
    CTCTTTTAGT CTGTTTCTCA GCACCAGGTG TGTTCAGAAC TTTACTCTCT
    TCCGCCATTT TAATCGTTGT GCTCTTTAAC TCTTCCTGTT CACAATAATC
    ACAAGAATTT GAATCACAAA AACAAAAAGT CACAAACTTT GAAATCAAAA
    TCAAAATCTA AGAACTTACA TTGGCTTTGA GCTGATTGAT GATCCTTAAT
    CGGAGAGCAT CGATAGTACC ATCGTTCATA AGATGTTCAA GAACGTCTTC
    TGGTTTAATT ACTGAAGAAG ACGACATTGT TCTTCAAAAT CCCCCAACCA
    AAAAAACCCT AAACGTTTTT GAAAACCGAT TATGATGCTT TGAGGTACCA
    GAGACAGATA CAAATAATCG TAGCTGTGAA AGATTCGATT TTGGAAAAAC
    CCAGAAGCTG AGAATCCAAA TTGGATTGAG AGAGTAGCAA TCAGAGATTG
    AAAACGAGTT TCTTTCGTCG GGAAATATTT GTCTAGCTTT GGTTCTCAAT
    CTTTCCTTTG AAAG

AT1G56420.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12530.1); Has 58 Blast hits to 58 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR