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54-0218-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 13590265 [Map]; Strand: c
      • AT3G33055.1 - [+] show detail - transposable element gene
        Distance: 6291; Region: intergenic
      • AT3G33058.1 - [+] show detail - transposable element gene
        Distance: -11535; Region: intergenic
    Flanking Genome Sequence: 54-0218-2 - 3-prime edge
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCATC 
    ACCACGCTTG GGTGGTTTTT GTCACGCGCT ATCAGCTCTT TAATCGCCTG
    TAAGTGCGCT TGCTGAGTTT CCCCGTTGAC TGCCTCTTCG CTGTACAGTT
    CTTTCGGCTT GTTGCCCGCT TCGAAACCAA TGCCTAAAGA GAGGTTAAAG
    CCGACAGCAG CAGTTTCATC AATCACCACG ATGCCATGTT CATCTGCCCA
    GTCGAGCATC TCTTCAGCGT AAGGGTAATG CGAGGTGATC TCATGTGTAT
    GATTGAGTAT AAGAACTTAA ACCGCAACCG GATCTTATAA ACCTAAGTAG
    TGTTTCCTGG TTAGAAGACA CAAAGCCAAA GACTCATATG GACTTTGGCT
    ACATCATGAA AGCTTTGAGA AGCAAGAAGA ATGTTGGTTA GTGTTTTGGA
    GTTGAATATG ACTTGAGCTC ATGTGTATGA ATGAATATAA GAACTTAAAC
    CGTAACCGGA TCTTAAAGGC GTAAGAATTA TATCCTTGTT AAAAGACACA
    AAGCCAAAGA CTCATATGGA CTTTGGGTAC ACCATGAAAG CTTTGAGAAG
    CAATAAGAAG GTTGGTTAGN GNTNTNGGAG TCNAATATNA CATGATCTCA
    TGTGTNTGAT TGANTATAAN AACTTAAACC GNNNCCGNAT NNTNNNAAGC
    CTAANNNNNG TTNNNTTGNT NGAGACAAAA NNCAANNACT NTNTGGANNN
    AAGNTNACCA NGAAAGCTTT ANAACAAGA

AT3G33055.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 3.2e-282 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR

AT3G33058.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 2.4e-112 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR