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Mutant Lines
54-0257-1

54-0257-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 26463102 [Map]; Strand: c
  - AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
    Distance: 0; Region: exon6 (CDS)
  - AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 54-0257-1 - 5-prime edge
```
CATGGGAGAA GTAACGAGAT GGATGAAAGG ACGAGATTCC AACGAAATCT 
TGGTGAGATC TGCTTCTTCC TCAACCTTCT GCAAGAGAGT CTTGACTTGG 
CCTCTCAAGA GAGCCTCACC AGATCCAGGA GTGTTATTGA TTCTGCTCAT 
GTTCCTCTTC CCAACAACTC CTGAGGACGG TGTCTGCATC GCCAGACCTA 
CNATCGGTGA GTCGTTGGTT ATGTCAAACA ACGCAGACCT GTCTTTTGCA 
CCGTTTCTCT GTTTCTCCTC TA
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 5676551 [Map]; Strand: c
- AT3G16660.1 - [+] show detail - Pollen Ole e 1 allergen and extensin family protein
  Distance: -278; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
ATTGGTTTTT ATTAATAAAC GACTAATCGT ATGATATTTC TTCAAAAAAA 
ACGTTGCATG GATATTATTG GACAAATTAT ATAATGTTAG AATCATACNC 
AGTTGAAACT ACATTTTAGG ACCCGGGTTT ACGATCAAAC CTAGGGACAA 
TTCAAATTGT ANAATAAAGT AAACGCATTA TTAGCGACTT TAAATATATA 
GAAAAGTGCA AAATAAATAG GAGGGGCANG ATCAATAAAA CTTCTTCTAT 
AAATAGAGCT GCATGGGGGA AGACACTTTA TCACATCCAA AACCAAAAGC 
AACACAAACA CACACACCAA AAAAAAAAAA AANNTTTTTN TTTTNANCNN 
ANCCGGGGNA NTGTAAAAAA AAAANCCGNT NNCCNTTTAT TNTATTTGGG 
NGNNNTTNAG GNGGGGTGNC CNANGGNNNN GNGCCNAATT GGNTTTNGGG 
GNAGAGGGGN NGTTGNGGGA NTATNCGGGG GNCTTNAGGG GGGNNCCNGG 
NNCACTGNTG GGGGNNTTAT TGGGGGNNNN TGATAATNGC AAANACTAAG 
NGGGGNNAAA TTNTNCNTTA AAGNGGGGNC ACAANGGGCA TNTCANGTTN 
TTATTNNATT TATAACATAA NGCACTGGTG CNCATANACC CATNNNNNNG 
GNTTGNTTGG NNNTNANTCN GAAAAAANNG TNAAAACGAA CNTGGNANAA 
AGNNNANTNG GGTAAACCGG CNAAATATNN GAA

AT3G16660.1

Model type: Protein coding
Short Description: Pollen Ole e 1 allergen and extensin family protein
Computational Description: Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT3G16670.1); Has 273 Blast hits to 210 proteins in 63 species: Archae - 0; Bacteria - 149; Metazoa - 42; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66230.1

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66230.2

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link: InterPro Scan - TAIR