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Mutant Lines
54-0259-1

54-0259-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26463102 [Map]; Strand: c
- AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 0; Region: exon6 (CDS)
- AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 0; Region: exon2 (CDS)

CNTGGGANAA NTNACGAGAT GGATGAAAGG ACGAGATTCC NACGAAATCT 
NGGTGAGATC TGCTTCTTCC TCAACCTTCT GCAAGAGAGT CTTGACTTGG 
CCTCTCAAGA GAGCCTCACC AGATCCAGGA GTGTTATTGA TTCTGCTCAT 
GTTCCTCTTC CCAACAACTC CTGAGGACGG TGTCTGCATC GCCAGACCTA 
CGATCGGTGA GTCGTTGGTT ATGTCAAACA ACGCAGACCT GTCTTTTGCA 
CCGTTTCTTT GTACCGACTT CGATTGACAT TTATCTGACC AATCATCCGC 
TTTCTCTGTA GGAGATAAAT TATAAACGAT CAGATCCAGA AACAATAGTC 
CGACTCAATA AACAAAATCA GGGAATCGGA CTATGGAGAC TTACTTGAGG 
ATAAGAGATT ATTGATAGCA GAGCGGGTCT GAGATCTCGT GACTCTTCTT 
GTCGATGATG GTGTCTCCAT TACGATTTAC TAAGAATCTA TTGAATCCGA 
TAAGCACAGA AAGAGTNATT TCTGGGAAAT TNAGCAGAGG AGAAGAGAAA 
GAAAACTCTA TTATATGAGA GAATCTNACA AGTGATTGTG GCGTNTGGGA 
NTTTGGGGTA AAGTATAAAT AAACAGGGGT ATTGAAAACG CTGTGAANGG 
TTTTTGAAAG AAAGTNGCCG TTGGGTACAN AATTGGAAGG AGNCGTT

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 26463218 [Map]; Strand: c
  - AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
    Distance: 0; Region: exon6 (CDS)
  - AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 54-0259-1 - 3-prime edge
```
CTCCCATGGG TCTTCTCGCC CCAACTCCGG CCAACACCCC CCAAGTTCTT 
GGTTTCTCAG ACGAAGTGCA GGTTGTGATC ACTTCTCCGG TAGTTGCAGG 
ACAATTCAGA GCACCGTCTC AGGTAAAACT AGATTTGTAT ATGTTTTTTG 
CTGATAGATG GAAGATTCTT GGGGAATGAT AAGAAGATGT TAACTTGGTT 
TTTATTCTTG CAGGTGGTGG AAAGCAACAT GTTTGATGAG AAAGAAGAAA 
GCT
```

AT5G66230.1

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66230.2

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link: InterPro Scan - TAIR