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54-0268-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 40149 [Map]; Strand: w
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-0268-1 - 5-prime edge 
    TTGGTGAGAG CGTTTATAGG CTCTCCGAAT AATAAGGGAA GATCATCAAA 
    TTGAAAAGAT TTTTGTTTCT CTATTTTTGG GCCTTCTTTA TTTCTTTTTC 
    TCTCGAAAAT GCACACACAC AGAGAAGAAG AAGATGGTCA AAGAGCAAGA 
    AGAGATTATG AGGATTTAAG GGATAGTCAA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 40033 [Map]; Strand: w
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-0268-1 - 3-prime edge 
    CTCACCAAAC AAACCAAAAC CAAAACCAAT CCAAGAAAAA AAAGAAACCT 
    CAAAGAAGAA GAAGATTCTC TCTGTAGAGG TAAATATGAA GCAAATGTCG 
    CATCTTGATG ATATTCCTTC GACGCCTGGC AAGTTCAAGC CCTACTTCCA 
    CCGTACGCGG TGGCAATCCT CCGTCGCCAA GCTCGCCTTT TGGTCTCTCG 
    TCTTCGTTGG TTTGATCTTC ATCTTCTTCT ACCGATCTCC CGTTTCCTCC 
    AATCCCGCCG ATCCTTCTCG CCGTTCTCTT CGTACCTACT CCTGGGGTGG 
    ACCCGCTTGG GAGAAACGGG TCAGATCCTC CGCCCGTCTC CGTACCCGCC 
    GCGGTTTCTC TGTTCTCGTC ACCGGAGCCG CCGGTTTCGT CGGTACCCAT 
    GTCTCCGCCG CTCTCAAACG CCGCGGAGAT GGCGTTNTGG GGCTNGACAA 
    CTNNAACGAN TACTACGATC CATCNCTCAG AGAGCNNGGC NNGCCCTTTT 
    GGAGANAAGC GGNTTGTTTG TTTGNNAANG ANACATNNTG NCNCTNCTCT 
    CTNGAANAAN NTCTNNGANG NTTTTTNTTN CNCACGTNNN GNATTNGGCN 
    GCTAAGNNTA NNGNNTGGNG CGNNNTGGGN NATACNAGCT NTTNTGNNGN 
    NAGNNNNTTN NCNNGGTGNN NNNTTNNNNT NAANANNGGN GNTNTNNNNN 
    ACTNNNGNNN NNTGTTNTNT NTNNNNTNCN GNNANNNNT

AT4G00110.1

Model type
Protein coding
Short Description
UDP-D-glucuronate 4-epimerase 3
Curator Summary
Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.
Computational Description
UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink).
Link
InterPro Scan - TAIR