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Mutant Lines
54-0278-1

54-0278-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 586215 [Map]; Strand: c
- AT1G02690.1 - [+] show detail - importin alpha isoform 6
  Distance: 0; Region: exon8 (CDS)
- AT1G02690.2 - [+] show detail - importin alpha isoform 6
  Distance: 0; Region: exon8 (CDS)

GAGATAGTCC AGCAAGCTTC CTTCTTGATA CTCTTCTTGT ATGTGTTCTT 
CAAAAGGTTT AACAGACCAG GAAGCGCTTG ACTGCTAATA ACCGCCTGTT 
ATGGAGAAAA CAGAGATGAT TTACTTTAAG TAAACATCAA AACTATAGGA 
GATATAAAAG GCAGACAGTT ACGGATAATA GACTACCTGA GTCTGAATAT 
CATCTCCGGT TACAATGTTA CCAATTGTAC GGAGAGCTGG AATCAGAACT 
GAGGGCGATG GATGACTAAG AAGACACAGA TAACGAGATC AGGTCAAGAT 
ATATGTGAAT GATATAGAAT TGGTAGCTAA AAGAAAATTA CTTACGCCAA 
GAGCTGAACA AGGCGAGGGA TGACACCAGC GTCGATAACA GTTTGTATTT 
TCTCGTTTGT ACCATCAGAG AGATATGAGA GAGCCCANGA TGCATCTGTG 
AGAACTTCTT CGNCNGTTGA ATGCAAAAAG CGCTCAAGAG CTGGTAAAGC 
NGCNNTTGNC TGCTCAACAA ATGCAATGAC ACATGNTCAN ATTAANAANN 
AGNGGNGAAA NANCACTTNA AANTGGGNTA TNTATCNNAT NCCCNGGAAA 
GNNGTTNANA TGCNNGCTGN GGNTNNCCTC TGCNNAAATG GGNGGNGGGN 
CNTGTNNCAT TNNNNAANNT GGANAGCNTT NNNNTGCNCN TGGNNNNGNN 
NNAAAAGNNA CNNCNNCCCC C

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 586331 [Map]; Strand: c
  - AT1G02690.1 - [+] show detail - importin alpha isoform 6
    Distance: 0; Region: intron8 (CDS)
  - AT1G02690.2 - [+] show detail - importin alpha isoform 6
    Distance: 0; Region: intron8 (CDS)
Flanking Genome Sequence: 54-0278-1 - 3-prime edge
```
ACTATCTCTA ACATTACAGC TGGGAACACA AGTCAAATTC AAGTGAGTTA 
TATACATTAT TAACAAATAA CAATGTTCAA AAACCAATAT CTTTTCTTAT 
AATTTAAAAC CAGAAGTCGT ATATACATTT GGATTTAACA TCGATAAATT 
TGTTGTGCAG GAAGTGTTTC AGGCAGGCAT TATTCGGCCT CTGATTAACC 
TGCTTGAGAT CGGTGAATT
```

AT1G02690.1

Model type: Protein coding
Short Description: importin alpha isoform 6
Curator Summary: Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.
Computational Description: importin alpha isoform 6 (IMPA-6); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G02150.1); Has 4537 Blast hits to 3341 proteins in 295 species: Archae - 4; Bacteria - 37; Metazoa - 1783; Fungi - 593; Plants - 1355; Viruses - 0; Other Eukaryotes - 765 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G02690.2

Model type: Protein coding
Short Description: importin alpha isoform 6
Curator Summary: Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.
Computational Description: importin alpha isoform 6 (IMPA-6); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G02150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR